RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 FAM81BQ96LP2 452 aa19.39■□□□□ 0.69
SHKBP1-202ENST00000593764 CNGB3Q9NQW8 809 aa19.39■□□□□ 0.69
SHKBP1-202ENST00000593764 AJAP1Q9UKB5 411 aaPredicted RBP19.39■□□□□ 0.69
SHKBP1-202ENST00000593764 NFE2L3Q9Y4A8 694 aa19.39■□□□□ 0.69
SHKBP1-202ENST00000593764 OTOGLQ3ZCN5 2332 aa19.39■□□□□ 0.69
SHKBP1-202ENST00000593764 A0A0A0MRY4 1105 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 KCNJ18B7U540 433 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 CHRM1P11229 460 aaPredicted RBP19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 LCP1P13796 627 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 PRKCSHP14314 528 aaPredicted RBP19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 HOXA6P31267 233 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 GPD2P43304 727 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 RPL34P49207 117 aaKnown RBP19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 DAOAP59103 153 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 COG7P83436 770 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 GAD2Q05329 585 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 GOLGA8FQ08AF8 430 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 GOLGA8DPQ0D2H9 430 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 KCNJ12Q14500 433 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 ARHGAP44Q17R89 818 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 TCP11X2Q5H9J9 407 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 BSPRYQ5W0U4 402 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 SIX6OS1Q8N1H7 587 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 PHTF2Q8N3S3 785 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 ZNF606Q8WXB4 792 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 SHC3Q92529 594 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 HSFY1Q96LI6 401 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 MARCH2Q9P0N8 246 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 RASAL2Q9UJF2 1139 aa19.38■□□□□ 0.69
SHKBP1-202ENST00000593764 GVINP1Q7Z2Y8 2422 aa19.37■□□□□ 0.69
SHKBP1-202ENST00000593764 PIK3R2O00459 728 aa19.37■□□□□ 0.69
SHKBP1-202ENST00000593764 ATG13O75143 517 aa19.37■□□□□ 0.69
SHKBP1-202ENST00000593764 LETM1O95202 739 aaPredicted RBP19.37■□□□□ 0.69
SHKBP1-202ENST00000593764 KCNMA1Q12791 1236 aa19.37■□□□□ 0.69
SHKBP1-202ENST00000593764 BTBD8Q5XKL5 378 aa19.37■□□□□ 0.69
SHKBP1-202ENST00000593764 DENND1BQ6P3S1 775 aa19.37■□□□□ 0.69
SHKBP1-202ENST00000593764 NAT16Q8N8M0 369 aa19.37■□□□□ 0.69
SHKBP1-202ENST00000593764 RPLP0P6Q8NHW5 317 aa19.37■□□□□ 0.69
SHKBP1-202ENST00000593764 P2RY11Q96G91 374 aa19.37■□□□□ 0.69
SHKBP1-202ENST00000593764 PNKPQ96T60 521 aa19.37■□□□□ 0.69
SHKBP1-202ENST00000593764 LSM7Q9UK45 103 aaKnown RBP19.37■□□□□ 0.69
SHKBP1-202ENST00000593764 MBD3O95983 291 aa19.36■□□□□ 0.69
SHKBP1-202ENST00000593764 FNTBP49356 437 aa19.36■□□□□ 0.69
SHKBP1-202ENST00000593764 MEA1Q16626 185 aa19.36■□□□□ 0.69
SHKBP1-202ENST00000593764 ANO4Q32M45 955 aa19.36■□□□□ 0.69
SHKBP1-202ENST00000593764 C11orf57Q6ZUT1 292 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-202ENST00000593764 RSRC2Q7L4I2 434 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-202ENST00000593764 USP33Q8TEY7 942 aa19.36■□□□□ 0.69
SHKBP1-202ENST00000593764 CLEC4CQ8WTT0 213 aa19.36■□□□□ 0.69
SHKBP1-202ENST00000593764 EDEM1Q92611 657 aa19.36■□□□□ 0.69
SHKBP1-202ENST00000593764 EPC1Q9H2F5 836 aa19.36■□□□□ 0.69
SHKBP1-202ENST00000593764 CYTH4Q9UIA0 394 aa19.36■□□□□ 0.69
SHKBP1-202ENST00000593764 DNAJC12Q9UKB3 198 aa19.36■□□□□ 0.69
SHKBP1-202ENST00000593764 ZNF292O60281 2723 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 SLC12A8A0AV02 714 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 TULP3O75386 442 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 KAT7O95251 611 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 HMBSP08397 361 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 EEF1GP26641 437 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 GNA15P30679 374 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 GRIA2P42262 883 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 CCDC183Q5T5S1 534 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 CDKAL1Q5VV42 579 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 HEATR6Q6AI08 1181 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 SMYD5Q6GMV2 418 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 TPGS1Q6ZTW0 290 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 SYT13Q7L8C5 426 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 IRGQQ8WZA9 623 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 ARHGEF4Q9NR80 690 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 ABCC13Q9NSE7 274 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 OLA1Q9NTK5 396 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 MARK1Q9P0L2 795 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 SFMBT1Q9UHJ3 866 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 STRIP2Q9ULQ0 834 aa19.35■□□□□ 0.69
SHKBP1-202ENST00000593764 MYO18AQ92614 2054 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 FOXN3O00409 490 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 TRIM24O15164 1050 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 THAP12O43422 761 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 MED7O43513 233 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 HRO43593 1189 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 APODP05090 189 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 CORO1AP31146 461 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 USP8P40818 1118 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 SEC13P55735 322 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 TRIP4Q15650 581 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 C2orf27AQ580R0 203 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 SASS6Q6UVJ0 657 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 LONP2Q86WA8 852 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 FMNL3Q8IVF7 1028 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 SCUBE3Q8IX30 993 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 STK32AQ8WU08 396 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 BBS2Q9BXC9 721 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 SLC4A5Q9BY07 1137 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 DCLK3Q9C098 648 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 ANO10Q9NW15 660 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 FANCLQ9NW38 375 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 TMEM63CQ9P1W3 806 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 WDR35Q9P2L0 1181 aa19.34■□□□□ 0.69
SHKBP1-202ENST00000593764 AGO1Q9UL18 857 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms