RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 RAB6CQ53S08 254 aa15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 EFHC2Q5JST6 749 aa15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 CCNI2Q6ZMN8 369 aaPredicted RBP15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 C16orf59Q7L2K0 433 aa15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 GSTA5Q7RTV2 222 aa15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 DDX53Q86TM3 631 aaKnown RBP15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 FAM131BQ86XD5 332 aa15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 JAMLQ86YT9 394 aa15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 RNF168Q8IYW5 571 aaPredicted RBP15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 ATL2Q8NHH9 583 aa15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 ATG4AQ8WYN0 398 aa15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 RNF34Q969K3 372 aa15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 SLC9A7Q96T83 725 aa15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 ZNF670Q9BS34 389 aa15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 RAB6CQ9H0N0 254 aa15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 FAM114A2Q9NRY5 505 aa15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.53■□□□□ 0.086e-9■□□□□ 10.2
GTF2F1-202ENST00000593678 SLC27A5Q9Y2P5 690 aa15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 SLC4A7Q9Y6M7 1214 aa15.53■□□□□ 0.08
GTF2F1-202ENST00000593678 COL4A6Q14031 1691 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 ENDOD1O94919 500 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 EFEMP2O95967 443 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 CD48P09326 243 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 HAPLN1P10915 354 aaPredicted RBP15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 YWHAQP27348 245 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 CA8P35219 290 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 DSG1Q02413 1049 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 DUSP4Q13115 394 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 BYSLQ13895 437 aaKnown RBP15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 DPYSL3Q14195 570 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 SDHAF4Q5VUM1 108 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 RSPO2Q6UXX9 243 aaPredicted RBP15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 SYDE1Q6ZW31 735 aaPredicted RBP15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 BBS12Q6ZW61 710 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 MON1AQ86VX9 555 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 ZDHHC14Q8IZN3 488 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 SPATA17Q96L03 361 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 HERPUD2Q9BSE4 406 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 GDF3Q9NR23 364 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 MRPL17Q9NRX2 175 aaKnown RBP15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 TMEM51Q9NW97 253 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 SCML2Q9UQR0 700 aa15.52■□□□□ 0.08
GTF2F1-202ENST00000593678 MKI67P46013 3256 aaKnown RBP15.52■□□□□ 0.07
GTF2F1-202ENST00000593678 ESYT3A0FGR9 886 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 FYNP06241 537 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 SYN1P17600 705 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 RPL17P18621 184 aaKnown RBP15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 GPR15P49685 360 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 ATXN1P54253 815 aaKnown RBP15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 EPHB4P54760 987 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 DPYSL2Q16555 572 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 TAZQ16635 292 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 ZC3H12AQ5D1E8 599 aaKnown RBP15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 TMEM240Q5SV17 173 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 TPGS2Q68CL5 300 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 TTC27Q6P3X3 843 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 CYP4V2Q6ZWL3 525 aaPredicted RBP15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 ANKS1BQ7Z6G8 1248 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 VPS52Q8N1B4 723 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 CCDC185Q8N715 623 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 ADAM32Q8TC27 787 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 FBXO32Q969P5 355 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 HAUS1Q96CS2 278 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 PGAP3Q96FM1 320 aaPredicted RBP15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 CEP295NLQ96MC4 621 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 ERP44Q9BS26 406 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 VN1R3Q9BXE9 311 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 TRIM31Q9BZY9 425 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 PCDH18Q9HCL0 1135 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 GPATCH2LQ9NWQ4 482 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 COMMD8Q9NX08 183 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 AFF4Q9UHB7 1163 aaKnown RBP15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 ZNF148Q9UQR1 794 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 SSX2IPQ9Y2D8 614 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 R3HDM2Q9Y2K5 976 aaKnown RBP15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 WDR27A2RRH5 827 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 ZNF487B1APH4 448 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 APOC4-APOC2K7ER74 178 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 APOL1O14791 398 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 APOC2P02655 101 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 ZFXP17010 805 aaPredicted RBP15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 TNNT3P45378 269 aaPredicted RBP15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 KCNJ1P48048 391 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 PSEN1P49768 467 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 HTRA4P83105 476 aaPredicted RBP15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 ANKRD20A8PQ5CZ79 823 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 BHLHA9Q7RTU4 235 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 TTC9BQ8N6N2 239 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 EIF1ADQ8N9N8 165 aaKnown RBP15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 ZNF461Q8TAF7 563 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 PHOSPHO2Q8TCD6 241 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 P3H4Q92791 437 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 SLCO2A1Q92959 643 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 RNF157Q96PX1 679 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 RAD9AQ99638 391 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 TRIM51Q9BSJ1 452 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 WDCPQ9H6R7 721 aa15.51■□□□□ 0.07
GTF2F1-202ENST00000593678 PIGVQ9NUD9 493 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms