RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 WNK3Q9BYP7 1800 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 IGLV3-22A0A075B6J6 115 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 MYOCOSA0A1B0GUC4 107 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 PLSCR1O15162 318 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 MAGEB2O15479 319 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 IDH3BO43837 385 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 FKBP6O75344 327 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 PSMD10O75832 226 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 GABBR2O75899 941 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 ARP10275 920 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 IL32P24001 234 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 CDK18Q07002 472 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 APOFQ13790 326 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 VPS72Q15906 364 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 Q3C1V9 767 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 C1orf146Q5VVC0 180 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 C11orf63Q6NUN7 778 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 IYDQ6PHW0 289 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 GALNT7Q86SF2 657 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 Q8N9G6 341 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 ELMO3Q96BJ8 720 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 TEKT3Q9BXF9 490 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 WDR11Q9BZH6 1224 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 WNT8AQ9H1J5 351 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 TCEAL9Q9UHQ7 104 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 GNPTGQ9UJJ9 305 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 FRMPD4Q14CM0 1322 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 STRCQ7RTU9 1775 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 GOLGA8MH3BSY2 632 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 EDF1O60869 148 aaKnown RBP12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 RFX1P22670 979 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 ECE1P42892 770 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 GBE1Q04446 702 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 INSCQ1MX18 579 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 SMU1Q2TAY7 513 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 ZDHHC14Q8IZN3 488 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 AHI1Q8N157 1196 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 LILRB2Q8N423 598 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 DTX3Q8N9I9 347 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 C7orf57Q8NEG2 295 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 OLIG1Q8TAK6 271 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 GCNAQ96QF7 691 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 SYT11Q9BT88 431 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 KLC2Q9H0B6 622 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 TDRD3Q9H7E2 651 aaKnown RBP12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 EHMT1Q9H9B1 1298 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 GMIPQ9P107 970 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 FAM198AQ9UFP1 575 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 PCYOX1Q9UHG3 505 aa12.66□□□□□ -0.38
SMARCA4-217ENST00000591595 ARPC4-TTLL3A0A0A6YYG9 625 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 MAGEC1O60732 1142 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 KRT5P13647 590 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 ADRA2BP18089 450 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 JAK1P23458 1154 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 KRT17Q04695 432 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 MAPK6Q16659 721 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 SLC47A2Q86VL8 602 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 RALGPS2Q86X27 583 aaPredicted RBP12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 CADM3Q8N126 398 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 XXYLT1Q8NBI6 393 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 CSRNP1Q96S65 589 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 DCUN1D5Q9BTE7 237 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 CDC42EP4Q9H3Q1 356 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 CAAP1Q9H8G2 361 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 DMAC2Q9NW81 257 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 ATP11BQ9Y2G3 1177 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 H7C0C1 242 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 RGS13O14921 159 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 THAP12O43422 761 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 RARBP10826 455 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 COL6A1P12109 1028 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 GJC1P36383 396 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 DPYSQ14117 519 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 NOP9Q86U38 636 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 KIAA2013Q8IYS2 634 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 SLC25A41Q8N5S1 370 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 GMCL1Q96IK5 515 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 PCDHB18PQ96TA0 734 aa12.65□□□□□ -0.38
SMARCA4-217ENST00000591595 GOLGB1Q14789 3259 aaKnown RBP12.65□□□□□ -0.39
SMARCA4-217ENST00000591595 A8MX80 341 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 CYP3A4P08684 503 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 CXCR2P25025 360 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 FDFT1P37268 417 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 P2RX3P56373 397 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 YWHAGP61981 247 aaKnown RBP eCLIP12.64□□□□□ -0.394e-6■■□□□ 14.2
SMARCA4-217ENST00000591595 LURAP1LQ8IV03 231 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 SRRM1Q8IYB3 904 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 ATG4AQ8WYN0 398 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 THAP11Q96EK4 314 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 FIZ1Q96SL8 496 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 Q9H521 79 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 NPHS2Q9NP85 383 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 PCDH12Q9NPG4 1184 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 ARMC1Q9NVT9 282 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 USP21Q9UK80 565 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 ANGPTL3Q9Y5C1 460 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 A0A1W2PRG0 241 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 UGT1A9O60656 530 aa12.64□□□□□ -0.39
SMARCA4-217ENST00000591595 GMNNO75496 209 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms