RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 HSD3B7Q9H2F3 369 aa23.43■■□□□ 1.34
MBD3-208ENST00000590830 SPHK2Q9NRA0 654 aa23.43■■□□□ 1.34
MBD3-208ENST00000590830 POLR3BQ9NW08 1133 aaPredicted RBP23.43■■□□□ 1.34
MBD3-208ENST00000590830 PIEZO1Q92508 2521 aa23.42■■□□□ 1.34
MBD3-208ENST00000590830 ZFHX2Q9C0A1 2572 aaPredicted RBP23.42■■□□□ 1.34
MBD3-208ENST00000590830 PES1O00541 588 aaKnown RBP23.42■■□□□ 1.34
MBD3-208ENST00000590830 THAP12O43422 761 aa23.42■■□□□ 1.34
MBD3-208ENST00000590830 RNF40O75150 1001 aa23.42■■□□□ 1.34
MBD3-208ENST00000590830 HMBSP08397 361 aa23.42■■□□□ 1.34
MBD3-208ENST00000590830 ADH5P11766 374 aa23.42■■□□□ 1.34
MBD3-208ENST00000590830 CLCN1P35523 988 aa23.42■■□□□ 1.34
MBD3-208ENST00000590830 CCR3P51677 355 aa23.42■■□□□ 1.34
MBD3-208ENST00000590830 KLHDC7AQ5VTJ3 777 aa23.42■■□□□ 1.34
MBD3-208ENST00000590830 BTBD8Q5XKL5 378 aa23.42■■□□□ 1.34
MBD3-208ENST00000590830 ASCL5Q7RTU5 278 aa23.42■■□□□ 1.34
MBD3-208ENST00000590830 SFTPA1Q8IWL2 248 aa23.42■■□□□ 1.34
MBD3-208ENST00000590830 WDTC1Q8N5D0 677 aa23.42■■□□□ 1.34
MBD3-208ENST00000590830 P2RY11Q96G91 374 aa23.42■■□□□ 1.34
MBD3-208ENST00000590830 NAA15Q9BXJ9 866 aaKnown RBP23.42■■□□□ 1.34
MBD3-208ENST00000590830 MARCH2Q9P0N8 246 aa23.42■■□□□ 1.34
MBD3-208ENST00000590830 K7EQS6 105 aa23.41■■□□□ 1.34
MBD3-208ENST00000590830 K7ESF4 209 aa23.41■■□□□ 1.34
MBD3-208ENST00000590830 ADH1CP00326 375 aa23.41■■□□□ 1.34
MBD3-208ENST00000590830 DMWDQ09019 674 aa23.41■■□□□ 1.34
MBD3-208ENST00000590830 RSRC2Q7L4I2 434 aaKnown RBP23.41■■□□□ 1.34
MBD3-208ENST00000590830 SCUBE3Q8IX30 993 aa23.41■■□□□ 1.34
MBD3-208ENST00000590830 SLC4A5Q9BY07 1137 aa23.41■■□□□ 1.34
MBD3-208ENST00000590830 FHOD1Q9Y613 1164 aa23.41■■□□□ 1.34
MBD3-208ENST00000590830 SLC12A8A0AV02 714 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 HOXC11O43248 304 aaPredicted RBP23.4■■□□□ 1.34
MBD3-208ENST00000590830 MED7O43513 233 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 PAPSS2O95340 614 aaPredicted RBP23.4■■□□□ 1.34
MBD3-208ENST00000590830 KLK7P49862 253 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 COG7P83436 770 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 MYL5Q02045 173 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 GAD2Q05329 585 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 GOLGA8FQ08AF8 430 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 GOLGA8DPQ0D2H9 430 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 MEA1Q16626 185 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 CAVIN1Q6NZI2 390 aaKnown RBP23.4■■□□□ 1.34
MBD3-208ENST00000590830 ETFBKMTQ8IXQ9 262 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 FAM71AQ8IYT1 594 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 PHTF2Q8N3S3 785 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 NAT16Q8N8M0 369 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 ZBTB44Q8NCP5 570 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 STK32AQ8WU08 396 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 IRGQQ8WZA9 623 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 LSM14BQ9BX40 385 aaKnown RBP23.4■■□□□ 1.34
MBD3-208ENST00000590830 MIS12Q9H081 205 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 SFMBT1Q9UHJ3 866 aa23.4■■□□□ 1.34
MBD3-208ENST00000590830 LSM7Q9UK45 103 aaKnown RBP23.4■■□□□ 1.34
MBD3-208ENST00000590830 CHURC1-FNTBB4DL54 471 aa23.39■■□□□ 1.33
MBD3-208ENST00000590830 FYNP06241 537 aa23.39■■□□□ 1.33
MBD3-208ENST00000590830 CHRM1P11229 460 aaPredicted RBP23.39■■□□□ 1.33
MBD3-208ENST00000590830 ZNF18P17022 549 aa23.39■■□□□ 1.33
MBD3-208ENST00000590830 DRAP1Q14919 205 aaPredicted RBP23.39■■□□□ 1.33
MBD3-208ENST00000590830 SMYD5Q6GMV2 418 aa23.39■■□□□ 1.33
MBD3-208ENST00000590830 SLC47A2Q86VL8 602 aa23.39■■□□□ 1.33
MBD3-208ENST00000590830 EXOC4Q96A65 974 aa23.39■■□□□ 1.33
MBD3-208ENST00000590830 PNKPQ96T60 521 aa23.39■■□□□ 1.33
MBD3-208ENST00000590830 ABCC13Q9NSE7 274 aa23.39■■□□□ 1.33
MBD3-208ENST00000590830 ZSCAN32Q9NX65 697 aa23.39■■□□□ 1.33
MBD3-208ENST00000590830 LIMA1Q9UHB6 759 aaKnown RBP23.39■■□□□ 1.33
MBD3-208ENST00000590830 MYOFQ9NZM1 2061 aa23.39■■□□□ 1.33
MBD3-208ENST00000590830 A0A0A0MRY4 1105 aa23.38■■□□□ 1.33
MBD3-208ENST00000590830 TRIM24O15164 1050 aa23.38■■□□□ 1.33
MBD3-208ENST00000590830 UCHL3P15374 230 aa23.38■■□□□ 1.33
MBD3-208ENST00000590830 CORO1AP31146 461 aaKnown RBP23.38■■□□□ 1.33
MBD3-208ENST00000590830 EIF2DP41214 584 aaKnown RBP23.38■■□□□ 1.33
MBD3-208ENST00000590830 COPB1P53618 953 aaKnown RBP23.38■■□□□ 1.33
MBD3-208ENST00000590830 ANO4Q32M45 955 aa23.38■■□□□ 1.33
MBD3-208ENST00000590830 FBXO43Q4G163 708 aa23.38■■□□□ 1.33
MBD3-208ENST00000590830 TPGS1Q6ZTW0 290 aa23.38■■□□□ 1.33
MBD3-208ENST00000590830 APTXQ7Z2E3 356 aaKnown RBP23.38■■□□□ 1.33
MBD3-208ENST00000590830 TMEM110Q86TL2 294 aa23.38■■□□□ 1.33
MBD3-208ENST00000590830 FMNL3Q8IVF7 1028 aa23.38■■□□□ 1.33
MBD3-208ENST00000590830 RNF139Q8WU17 664 aa23.38■■□□□ 1.33
MBD3-208ENST00000590830 NKD2Q969F2 451 aaPredicted RBP23.38■■□□□ 1.33
MBD3-208ENST00000590830 ST7Q9NRC1 585 aa23.38■■□□□ 1.33
MBD3-208ENST00000590830 TJP2Q9UDY2 1190 aa23.38■■□□□ 1.33
MBD3-208ENST00000590830 AGO1Q9UL18 857 aaKnown RBP23.38■■□□□ 1.33
MBD3-208ENST00000590830 STRIP2Q9ULQ0 834 aa23.38■■□□□ 1.33
MBD3-208ENST00000590830 PRR23AA6NEV1 266 aa23.37■■□□□ 1.33
MBD3-208ENST00000590830 LRRC10BA6NIK2 292 aa23.37■■□□□ 1.33
MBD3-208ENST00000590830 PAPSS1O43252 624 aaPredicted RBP23.37■■□□□ 1.33
MBD3-208ENST00000590830 LILRB5O75023 590 aa23.37■■□□□ 1.33
MBD3-208ENST00000590830 FBXO21O94952 628 aa23.37■■□□□ 1.33
MBD3-208ENST00000590830 PTK2Q05397 1052 aa23.37■■□□□ 1.33
MBD3-208ENST00000590830 TRIP4Q15650 581 aaPredicted RBP23.37■■□□□ 1.33
MBD3-208ENST00000590830 ANO6Q4KMQ2 910 aa23.37■■□□□ 1.33
MBD3-208ENST00000590830 RPLP0P6Q8NHW5 317 aa23.37■■□□□ 1.33
MBD3-208ENST00000590830 GANQ9H2C0 597 aa23.37■■□□□ 1.33
MBD3-208ENST00000590830 PLCB1Q9NQ66 1216 aa23.37■■□□□ 1.33
MBD3-208ENST00000590830 OLA1Q9NTK5 396 aaKnown RBP23.37■■□□□ 1.33
MBD3-208ENST00000590830 MARK1Q9P0L2 795 aa23.37■■□□□ 1.33
MBD3-208ENST00000590830 PCDHGC3Q9UN70 934 aa23.37■■□□□ 1.33
MBD3-208ENST00000590830 PCDHGA2Q9Y5H1 932 aa23.37■■□□□ 1.33
MBD3-208ENST00000590830 E5RJQ4 531 aa23.36■■□□□ 1.33
MBD3-208ENST00000590830 GFRA3O60609 400 aa23.36■■□□□ 1.33
MBD3-208ENST00000590830 TULP3O75386 442 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms