RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 PLA2G2FQ9BZM2 168 aa20.03■□□□□ 0.8
DDX39A-214ENST00000590556 DEF6Q9H4E7 631 aa20.03■□□□□ 0.8
DDX39A-214ENST00000590556 POPDC2Q9HBU9 364 aa20.03■□□□□ 0.8
DDX39A-214ENST00000590556 CD320Q9NPF0 282 aa20.03■□□□□ 0.8
DDX39A-214ENST00000590556 OBP2AQ9NY56 170 aa20.03■□□□□ 0.8
DDX39A-214ENST00000590556 MARCH2Q9P0N8 246 aa20.03■□□□□ 0.8
DDX39A-214ENST00000590556 WDR35Q9P2L0 1181 aa20.03■□□□□ 0.8
DDX39A-214ENST00000590556 RASAL2Q9UJF2 1139 aa20.03■□□□□ 0.8
DDX39A-214ENST00000590556 NCOR1O75376 2440 aa20.03■□□□□ 0.8
DDX39A-214ENST00000590556 HELZP42694 1942 aaKnown RBP20.02■□□□□ 0.8
DDX39A-214ENST00000590556 A0A087X0T9 212 aa20.02■□□□□ 0.8
DDX39A-214ENST00000590556 FTLP02792 175 aaPredicted RBP20.02■□□□□ 0.8
DDX39A-214ENST00000590556 FYNP06241 537 aa20.02■□□□□ 0.8
DDX39A-214ENST00000590556 FAM228BP0C875 321 aa20.02■□□□□ 0.8
DDX39A-214ENST00000590556 RNASE9P60153 205 aaKnown RBP20.02■□□□□ 0.8
DDX39A-214ENST00000590556 VITQ6UXI7 678 aa20.02■□□□□ 0.8
DDX39A-214ENST00000590556 DDX42Q86XP3 938 aaKnown RBP eCLIP20.02■□□□□ 0.84e-6■□□□□ 8.2
DDX39A-214ENST00000590556 MIB1Q86YT6 1006 aa20.02■□□□□ 0.8
DDX39A-214ENST00000590556 MFSD6LQ8IWD5 586 aa20.02■□□□□ 0.8
DDX39A-214ENST00000590556 MCOLN2Q8IZK6 566 aa20.02■□□□□ 0.8
DDX39A-214ENST00000590556 SLC44A3Q8N4M1 653 aa20.02■□□□□ 0.8
DDX39A-214ENST00000590556 VCPIP1Q96JH7 1222 aa20.02■□□□□ 0.8
DDX39A-214ENST00000590556 CCDC42Q96M95 316 aa20.02■□□□□ 0.8
DDX39A-214ENST00000590556 KLF16Q9BXK1 252 aaPredicted RBP20.02■□□□□ 0.8
DDX39A-214ENST00000590556 NHEJ1Q9H9Q4 299 aaPredicted RBP20.02■□□□□ 0.8
DDX39A-214ENST00000590556 GKN1Q9NS71 199 aa20.02■□□□□ 0.8
DDX39A-214ENST00000590556 NAALADL1Q9UQQ1 740 aa20.02■□□□□ 0.8
DDX39A-214ENST00000590556 LEFTY2O00292 366 aa20.01■□□□□ 0.79
DDX39A-214ENST00000590556 AKR1B10O60218 316 aa20.01■□□□□ 0.79
DDX39A-214ENST00000590556 MSANTD2Q6P1R3 559 aa20.01■□□□□ 0.79
DDX39A-214ENST00000590556 YAF2Q8IY57 180 aa20.01■□□□□ 0.79
DDX39A-214ENST00000590556 BPIFB1Q8TDL5 484 aa20.01■□□□□ 0.79
DDX39A-214ENST00000590556 DEPDC1BQ8WUY9 529 aa20.01■□□□□ 0.79
DDX39A-214ENST00000590556 KHSRPQ92945 711 aaKnown RBP eCLIP20.01■□□□□ 0.79
DDX39A-214ENST00000590556 ZFRQ96KR1 1074 aaKnown RBP20.01■□□□□ 0.79
DDX39A-214ENST00000590556 LRRC3BQ96PB8 259 aa20.01■□□□□ 0.79
DDX39A-214ENST00000590556 SLC2A13Q96QE2 648 aa20.01■□□□□ 0.79
DDX39A-214ENST00000590556 ISCUQ9H1K1 167 aa20.01■□□□□ 0.79
DDX39A-214ENST00000590556 CFAP97Q9P2B7 532 aa20.01■□□□□ 0.79
DDX39A-214ENST00000590556 SLC12A8A0AV02 714 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 DAB1O75553 588 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 TCF3P15923 654 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 PSMC3P17980 439 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 COG7P83436 770 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 ZXDBP98169 803 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 USP4Q13107 963 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 TDGQ13569 410 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 GRM2Q14416 872 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 GSE1Q14687 1217 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 ZNF77Q15935 545 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 SLC18A3Q16572 532 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 ASTE1Q2TB18 679 aaPredicted RBP20■□□□□ 0.79
DDX39A-214ENST00000590556 DCAF6Q58WW2 860 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 CCDC122Q5T0U0 273 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 SYPL2Q5VXT5 272 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 ALKBH5Q6P6C2 394 aaKnown RBP20■□□□□ 0.79
DDX39A-214ENST00000590556 DNAAF5Q86Y56 855 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 DEFB106AQ8N104 65 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 TRMT61BQ9BVS5 477 aaKnown RBP20■□□□□ 0.79
DDX39A-214ENST00000590556 THG1LQ9NWX6 298 aaKnown RBP20■□□□□ 0.79
DDX39A-214ENST00000590556 SFMBT1Q9UHJ3 866 aa20■□□□□ 0.79
DDX39A-214ENST00000590556 IRF1P10914 325 aa19.99■□□□□ 0.79
DDX39A-214ENST00000590556 RRM1P23921 792 aa19.99■□□□□ 0.79
DDX39A-214ENST00000590556 GSCP56915 257 aaPredicted RBP19.99■□□□□ 0.79
DDX39A-214ENST00000590556 GFPT1Q06210 699 aaPredicted RBP19.99■□□□□ 0.79
DDX39A-214ENST00000590556 CC2D1AQ6P1N0 951 aaPredicted RBP19.99■□□□□ 0.79
DDX39A-214ENST00000590556 DNAJC24Q6P3W2 148 aa19.99■□□□□ 0.79
DDX39A-214ENST00000590556 C3orf20Q8ND61 904 aa19.99■□□□□ 0.79
DDX39A-214ENST00000590556 RIN3Q8TB24 985 aa19.99■□□□□ 0.79
DDX39A-214ENST00000590556 DQX1Q8TE96 717 aaKnown RBP19.99■□□□□ 0.79
DDX39A-214ENST00000590556 TRIM11Q96F44 468 aa19.99■□□□□ 0.79
DDX39A-214ENST00000590556 SELENOOQ9BVL4 669 aa19.99■□□□□ 0.79
DDX39A-214ENST00000590556 SMOC2Q9H3U7 446 aa19.99■□□□□ 0.79
DDX39A-214ENST00000590556 METTL5Q9NRN9 209 aaKnown RBP19.99■□□□□ 0.79
DDX39A-214ENST00000590556 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.99■□□□□ 0.79
DDX39A-214ENST00000590556 TMEM59LQ9UK28 342 aa19.99■□□□□ 0.79
DDX39A-214ENST00000590556 SORCS3Q9UPU3 1222 aa19.99■□□□□ 0.79
DDX39A-214ENST00000590556 SH3BP1Q9Y3L3 701 aa19.99■□□□□ 0.79
DDX39A-214ENST00000590556 HMBSP08397 361 aa19.98■□□□□ 0.79
DDX39A-214ENST00000590556 MYBL1P10243 752 aa19.98■□□□□ 0.79
DDX39A-214ENST00000590556 KRT3P12035 628 aa19.98■□□□□ 0.79
DDX39A-214ENST00000590556 NOS2P35228 1153 aa19.98■□□□□ 0.79
DDX39A-214ENST00000590556 MATKP42679 507 aa19.98■□□□□ 0.79
DDX39A-214ENST00000590556 KPNA1P52294 538 aaPredicted RBP19.98■□□□□ 0.79
DDX39A-214ENST00000590556 FCHO2Q0JRZ9 810 aa19.98■□□□□ 0.79
DDX39A-214ENST00000590556 MTF1Q14872 753 aa19.98■□□□□ 0.79
DDX39A-214ENST00000590556 ARCQ7LC44 396 aa19.98■□□□□ 0.79
DDX39A-214ENST00000590556 HBS1LQ9Y450 684 aaKnown RBP19.98■□□□□ 0.79
DDX39A-214ENST00000590556 TTC28Q96AY4 2481 aa19.98■□□□□ 0.79
DDX39A-214ENST00000590556 E2F8A0AVK6 867 aa19.97■□□□□ 0.79
DDX39A-214ENST00000590556 SIGLEC16A6NMB1 481 aa19.97■□□□□ 0.79
DDX39A-214ENST00000590556 ZNF263O14978 683 aa19.97■□□□□ 0.79
DDX39A-214ENST00000590556 MSI1O43347 362 aaKnown RBP19.97■□□□□ 0.79
DDX39A-214ENST00000590556 GJB6O95452 261 aa19.97■□□□□ 0.79
DDX39A-214ENST00000590556 GDI1P31150 447 aa19.97■□□□□ 0.79
DDX39A-214ENST00000590556 GSDMDP57764 484 aa19.97■□□□□ 0.79
DDX39A-214ENST00000590556 TRIP4Q15650 581 aaPredicted RBP19.97■□□□□ 0.79
DDX39A-214ENST00000590556 ARHGAP29Q52LW3 1261 aa19.97■□□□□ 0.79
DDX39A-214ENST00000590556 TAC4Q86UU9 113 aa19.97■□□□□ 0.79
DDX39A-214ENST00000590556 TMTC1Q8IUR5 882 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms