RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ZNF778Q96MU6 729 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 HERC2P3Q9BVR0 1158 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 EPS15L1Q9UBC2 864 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 LAMB2P55268 1798 aa15.71■□□□□ 0.1
CIRBP-228ENST00000590347 ATRNL1Q5VV63 1379 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 F5H423 210 aaPredicted RBP15.7■□□□□ 0.1
CIRBP-228ENST00000590347 MAFGO15525 162 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 KDM1AO60341 852 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 S100BP04271 92 aaPredicted RBP15.7■□□□□ 0.1
CIRBP-228ENST00000590347 PHBP35232 272 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 RHBDL3P58872 404 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 NFX1Q12986 1120 aaKnown RBP15.7■□□□□ 0.1
CIRBP-228ENST00000590347 SBK1Q52WX2 424 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 RARS2Q5T160 578 aaKnown RBP15.7■□□□□ 0.1
CIRBP-228ENST00000590347 ATG14Q6ZNE5 492 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 VASH1Q7L8A9 365 aaPredicted RBP15.7■□□□□ 0.1
CIRBP-228ENST00000590347 RTKN2Q8IZC4 609 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 NAT16Q8N8M0 369 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 USP33Q8TEY7 942 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 MPHOSPH6Q99547 160 aaKnown RBP15.7■□□□□ 0.1
CIRBP-228ENST00000590347 SLC17A6Q9P2U8 582 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 TCRBV9S1A1TA0A576 114 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 C7orf72A4D263 438 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 DENRO43583 198 aaKnown RBP15.7■□□□□ 0.1
CIRBP-228ENST00000590347 TGDSO95455 350 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 CLIC3O95833 236 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 IDO1P14902 403 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 NUDT2P50583 147 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 CDK9P50750 372 aaKnown RBP15.7■□□□□ 0.1
CIRBP-228ENST00000590347 STX3Q13277 289 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 PPP2R5DQ14738 602 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 ZNF423Q2M1K9 1284 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 ANO4Q32M45 955 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 KBTBD6Q86V97 674 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 AHI1Q8N157 1196 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 NLRP7Q8WX94 980 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 CEP295NLQ96MC4 621 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 RANBP9Q96S59 729 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 KLHL25Q9H0H3 589 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 ACSS3Q9H6R3 686 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 EPS8L2Q9H6S3 715 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 HOMER2Q9NSB8 354 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 GPRC5DQ9NZD1 345 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 CNTNAP2Q9UHC6 1331 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 AP1G1O43747 822 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 CCNT2O60583 730 aaKnown RBP15.7■□□□□ 0.1
CIRBP-228ENST00000590347 AMHP03971 560 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 WEE2P0C1S8 567 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 MXI1P50539 228 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 VAMP7P51809 220 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 RPL7AP62424 266 aaKnown RBP15.7■□□□□ 0.1
CIRBP-228ENST00000590347 MRPS5P82675 430 aaKnown RBP15.7■□□□□ 0.1
CIRBP-228ENST00000590347 NFIAQ12857 509 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 NR1D2Q14995 579 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 KCNT1Q5JUK3 1230 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 RNF19BQ6ZMZ0 732 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 BTLAQ7Z6A9 289 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 ADGRG6Q86SQ4 1221 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 EME1Q96AY2 570 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 VPS50Q96JG6 964 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 TIMM22Q9Y584 194 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 ST14Q9Y5Y6 855 aa15.7■□□□□ 0.1
CIRBP-228ENST00000590347 C1orf232A0A0U1RR37 186 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 FAM86B1E9PN63 330 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 NEMP1O14524 444 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 KCNH1O95259 989 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 SERPINA6P08185 405 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 FAM86B2P0C5J1 330 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 DHRS4L1P0CG22 281 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 THOP1P52888 689 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 CENPCQ03188 943 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 FLOT2Q14254 428 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 SLC27A3Q5K4L6 730 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 MIER3Q7Z3K6 550 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 BHLHE22Q8NFJ8 381 aaPredicted RBP15.69■□□□□ 0.1
CIRBP-228ENST00000590347 CPT1BQ92523 772 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 ATP6V0A1Q93050 837 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 ISOC1Q96CN7 298 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 MARK4Q96L34 752 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 TMEM79Q9BSE2 394 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 ZNF696Q9H7X3 374 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 XAB2Q9HCS7 855 aaKnown RBP15.69■□□□□ 0.1
CIRBP-228ENST00000590347 CNTN3Q9P232 1028 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 SCN7AQ01118 1682 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 SDR42E2A6NKP2 422 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 DDX39AO00148 427 aaKnown RBP15.69■□□□□ 0.1
CIRBP-228ENST00000590347 TKTP29401 623 aaKnown RBP15.69■□□□□ 0.1
CIRBP-228ENST00000590347 STAT2P52630 851 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 MS4A2Q01362 244 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 HYIQ5T013 277 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 SLC9A4Q6AI14 798 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 SNRNP48Q6IEG0 339 aaKnown RBP15.69■□□□□ 0.1
CIRBP-228ENST00000590347 ACAD10Q6JQN1 1059 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 FBXW8Q8N3Y1 598 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 ZMAT2Q96NC0 199 aaKnown RBP15.69■□□□□ 0.1
CIRBP-228ENST00000590347 CDRT15Q96T59 188 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 GBA3Q9H227 469 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 C17orf75Q9HAS0 396 aa15.69■□□□□ 0.1
CIRBP-228ENST00000590347 XPO7Q9UIA9 1087 aaKnown RBP15.69■□□□□ 0.1
CIRBP-228ENST00000590347 APOBEC2Q9Y235 224 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms