RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 RBAKQ9NYW8 714 aaPredicted RBP12.31□□□□□ -0.44
CAPNS1-209ENST00000590049 LIMA1Q9UHB6 759 aaKnown RBP12.31□□□□□ -0.44
CAPNS1-209ENST00000590049 BTBD3Q9Y2F9 522 aa12.31□□□□□ -0.44
CAPNS1-209ENST00000590049 FNDC3AQ9Y2H6 1198 aaKnown RBP12.31□□□□□ -0.44
CAPNS1-209ENST00000590049 HES2Q9Y543 173 aa12.31□□□□□ -0.44
CAPNS1-209ENST00000590049 SPENQ96T58 3664 aaKnown RBP12.31□□□□□ -0.44
CAPNS1-209ENST00000590049 SPG11Q96JI7 2443 aa12.31□□□□□ -0.44
CAPNS1-209ENST00000590049 CELSR2Q9HCU4 2923 aa12.31□□□□□ -0.44
CAPNS1-209ENST00000590049 BSNQ9UPA5 3926 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 TTLL13PA6NNM8 815 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 SEC24AO95486 1093 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 PRAMEF12O95522 483 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 CLTAP09496 248 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 CDK4P11802 303 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 GRNP28799 593 aaKnown RBP12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 MATKP42679 507 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 ACOT2P49753 483 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 VAMP7P51809 220 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 COPB1P53618 953 aaKnown RBP12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 FOXK1P85037 733 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 TWF1Q12792 350 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 CETN1Q12798 172 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 BFSP1Q12934 665 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 TUSC3Q13454 348 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 VWA3BQ502W6 1294 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 SLC8B1Q6J4K2 584 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 TMEM92Q6UXU6 159 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 CBWD2Q8IUF1 395 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 SLC41A1Q8IVJ1 513 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 CCDC33Q8N5R6 958 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 HMGB4Q8WW32 186 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 FAM212AQ96EL1 285 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 HIC2Q96JB3 615 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 HSPA12BQ96MM6 686 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 VPS16Q9H269 839 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 PTPRHQ9HD43 1115 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 TOPORSQ9NS56 1045 aaPredicted RBP12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 IFNKQ9P0W0 207 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 PCDHGA1Q9Y5H4 931 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 KIAA1549LQ6ZVL6 1849 aa12.3□□□□□ -0.44
CAPNS1-209ENST00000590049 GOLGA6L6A8MZA4 724 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 IL18RAPO95256 599 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 HNRNPLP14866 589 aaKnown RBP eCLIP12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 ITGB6P18564 788 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 TNNI1P19237 187 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 GRM5P41594 1212 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 POU5F1Q01860 360 aaKnown RBP12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 CYP24A1Q07973 514 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 SYCP2LQ5T4T6 812 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 TRIM68Q6AZZ1 485 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 IL27RAQ6UWB1 636 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 IRF2BP1Q8IU81 584 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 DRC7Q8IY82 874 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 SRRM1Q8IYB3 904 aaKnown RBP12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 PGBD3Q8N328 593 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 TMC2Q8TDI7 906 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 CCDC127Q96BQ5 260 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 PCMTD1Q96MG8 357 aaPredicted RBP12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 ZNF578Q96N58 590 aaPredicted RBP12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 DPH1Q9BZG8 443 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 HSD3B7Q9H2F3 369 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 NDST4Q9H3R1 872 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 MMRN2Q9H8L6 949 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 GMIPQ9P107 970 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 PARP2Q9UGN5 583 aa12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 CPSF3Q9UKF6 684 aaKnown RBP12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 R3HCC1Q9Y3T6 440 aaKnown RBP12.29□□□□□ -0.44
CAPNS1-209ENST00000590049 ADGRG4Q8IZF6 3080 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 CASTOR2A6NHX0 329 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 CLSTN1O94985 981 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 ADRB2P07550 413 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 DLATP10515 647 aaKnown RBP12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 SFTPCP11686 197 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 WEE1P30291 646 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 GJA4P35212 333 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 GRK6P43250 576 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 AP3M2P53677 418 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 SEC13P55735 322 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 UBXN1Q04323 297 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 ENPEPQ07075 957 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 PSMD6Q15008 389 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 SEZ6Q53EL9 994 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 ZC3H18Q86VM9 953 aaKnown RBP12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 BRSK2Q8IWQ3 736 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 TRIM59Q8IWR1 403 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 CD302Q8IX05 232 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 EIF2AQ9BY44 585 aaKnown RBP12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 XPO4Q9C0E2 1151 aaKnown RBP12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 HAPLN2Q9GZV7 340 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 CEP192Q8TEP8 1941 aa12.28□□□□□ -0.44
CAPNS1-209ENST00000590049 MYO16Q9Y6X6 1858 aa12.27□□□□□ -0.44
CAPNS1-209ENST00000590049 A0A1B0GTH6 734 aa12.27□□□□□ -0.45
CAPNS1-209ENST00000590049 LRRC10BA6NIK2 292 aa12.27□□□□□ -0.45
CAPNS1-209ENST00000590049 LGALS16A8MUM7 142 aa12.27□□□□□ -0.45
CAPNS1-209ENST00000590049 ABLIM1O14639 778 aa12.27□□□□□ -0.45
CAPNS1-209ENST00000590049 ADCY5O95622 1261 aa12.27□□□□□ -0.45
CAPNS1-209ENST00000590049 TMEM191BP0C7N4 346 aa12.27□□□□□ -0.45
CAPNS1-209ENST00000590049 TNFSF9P41273 254 aa12.27□□□□□ -0.45
CAPNS1-209ENST00000590049 ARPP19P56211 112 aa12.27□□□□□ -0.45
CAPNS1-209ENST00000590049 IGFBP7Q16270 282 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms