RNA–Protein interactions for RNA: ENST00000589697.1

RAB8A-205, Transcript of RAB8A, member RAS oncogene family, human

TSL 1 (best)

Gene RAB8A, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB8A-205	ENST00000589697	NAALADL1	Q9UQQ1	740 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	DRG1	Q9Y295	367 aa	Known RBP	13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	USP3	Q9Y6I4	520 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	GOLGA6B	A6NDN3	693 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	NT5C1B-RDH14	C9J2C7	533 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	APOL1	O14791	398 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	KIAA0355	O15063	1070 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	FYN	P06241	537 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	CPB1	P15086	417 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	RAG1	P15918	1043 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	TGM2	P21980	687 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	MAGEA11	P43364	429 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	AIF1	P55008	147 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	PITX1	P78337	314 aa	Predicted RBP	13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	NME3	Q13232	169 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	MTMR3	Q13615	1198 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	CA9	Q16790	459 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	ANKRD20A8P	Q5CZ79	823 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	ZDHHC24	Q6UX98	284 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	ALLC	Q8N6M5	410 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	BBOF1	Q8ND07	529 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	FBXO25	Q8TCJ0	367 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	FAF2	Q96CS3	445 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	VWCE	Q96DN2	955 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	PGAP3	Q96FM1	320 aa	Predicted RBP	13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	B3GALT6	Q96L58	329 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	RUFY1	Q96T51	708 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	FAM204A	Q9H8W3	233 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	COX16	Q9P0S2	106 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	CALCOCO1	Q9P1Z2	691 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	FZD10	Q9ULW2	581 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	NEU2	Q9Y3R4	380 aa		13.32	□□□□□ -0.28
RAB8A-205	ENST00000589697	COL4A4	P53420	1690 aa	Predicted RBP	13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	SGK1	O00141	431 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	KRT14	P02533	472 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	ZFX	P17010	805 aa	Predicted RBP	13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	ITIH2	P19823	946 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	L1CAM	P32004	1257 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	ADCY8	P40145	1251 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	ARL4A	P40617	200 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	EIF3E	P60228	445 aa	Known RBP	13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	CAV1	Q03135	178 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	SMARCB1	Q12824	385 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	TRIP13	Q15645	432 aa	Predicted RBP	13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	HSP90B2P	Q58FF3	399 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	EFHC2	Q5JST6	749 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	ALS2CL	Q60I27	953 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	BEND5	Q7L4P6	421 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	TMC3	Q7Z5M5	1100 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	TMEM173	Q86WV6	379 aa	Predicted RBP	13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	TMEM199	Q8N511	208 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	TSEN2	Q8NCE0	465 aa	Known RBP	13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	P3H4	Q92791	437 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	ART4	Q93070	314 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	C8orf48	Q96LL4	319 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	KCTD15	Q96SI1	283 aa	Predicted RBP	13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	SLC9A7	Q96T83	725 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	PIGV	Q9NUD9	493 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	DDIT4	Q9NX09	232 aa		13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.31	□□□□□ -0.28
RAB8A-205	ENST00000589697	TRIM43B	A6NCK2	446 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	TNFRSF10B	O14763	440 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	NDC80	O14777	642 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	F9	P00740	461 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	CSF2RA	P15509	400 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	PECAM1	P16284	738 aa	Predicted RBP	13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	IL4R	P24394	825 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	KLRC2	P26717	231 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	VPS41	P49754	854 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	IFRD2	Q12894	506 aa	Predicted RBP	13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	NOMO1	Q15155	1222 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	RTP2	Q5QGT7	225 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	BSPRY	Q5W0U4	402 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	SLC9A4	Q6AI14	798 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	SCAMP5	Q8TAC9	235 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	SPPL2B	Q8TCT7	592 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	EDEM1	Q92611	657 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	TOP1MT	Q969P6	601 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	NTAN1	Q96AB6	310 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	PGLYRP2	Q96PD5	576 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	TMEM121	Q9BTD3	319 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	PCDH9	Q9HC56	1237 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	MED4	Q9NPJ6	270 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	SAE1	Q9UBE0	346 aa	Predicted RBP	13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	COL4A6	Q14031	1691 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	HSPA1A	P0DMV8	641 aa	Known RBP	13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	HSPA1B	P0DMV9	641 aa	Known RBP	13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	ARPP19	P56211	112 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	YWHAG	P61981	247 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	ROR1	Q01973	937 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	DHX9	Q08211	1270 aa	Known RBP	13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	GPR17	Q13304	367 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	USP41	Q3LFD5	358 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	ARL13B	Q3SXY8	428 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	SPOUT1	Q5T280	376 aa	Known RBP	13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	CFAP58	Q5T655	872 aa		13.3	□□□□□ -0.28
RAB8A-205	ENST00000589697	MFSD5	Q6N075	450 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms