RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 MMRN2Q9H8L6 949 aa11.74□□□□□ -0.53
DDX39A-210ENST00000589675 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.74□□□□□ -0.531e-6■■■■■ 28.1
DDX39A-210ENST00000589675 CISHQ9NSE2 258 aa11.74□□□□□ -0.53
DDX39A-210ENST00000589675 ZNF510Q9Y2H8 683 aa11.74□□□□□ -0.53
DDX39A-210ENST00000589675 GOLGA6L4A6NEF3 574 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 IRF1P10914 325 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 RALAP11233 206 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 GBP1P32455 592 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 RAD23BP54727 409 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 NUCB2P80303 420 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 COG7P83436 770 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 CACNA1BQ00975 2339 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 CREB5Q02930 508 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 KDSRQ06136 332 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 BECN1Q14457 450 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 CCDC6Q16204 474 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 RAB41Q5JT25 222 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 C10orf120Q5SQS8 335 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 ARHGAP18Q8N392 663 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 ZNF513Q8N8E2 541 aaPredicted RBP11.73□□□□□ -0.53
DDX39A-210ENST00000589675 NAT16Q8N8M0 369 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 ANKRD52Q8NB46 1076 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 TSG101Q99816 390 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 TPSD1Q9BZJ3 242 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 RXFP3Q9NSD7 469 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 HOOK1Q9UJC3 728 aaKnown RBP11.73□□□□□ -0.53
DDX39A-210ENST00000589675 NAGPAQ9UK23 515 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 FBXO10Q9UK96 956 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 GTF3C3Q9Y5Q9 886 aa11.73□□□□□ -0.53
DDX39A-210ENST00000589675 PMM2O15305 246 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 STC2O76061 302 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 CISD3P0C7P0 127 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 TYRP14679 529 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 NTSR1P30989 418 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 DPP6P42658 865 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 SLC8A3P57103 927 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 CBWD6Q4V339 395 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 ZNF394Q53GI3 561 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 CBWD3Q5JTY5 395 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 CBWD5Q5RIA9 395 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 C10orf76Q5T2E6 689 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 ANKRD40Q6AI12 368 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 PM20D1Q6GTS8 502 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 GRAMD4Q6IC98 578 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 TATDN2Q93075 761 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 JAKMIP2Q96AA8 810 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 EEF2KMTQ96G04 330 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 SPACA7Q96KW9 195 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 LSM14BQ9BX40 385 aaKnown RBP11.72□□□□□ -0.53
DDX39A-210ENST00000589675 BBS2Q9BXC9 721 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 DCLK3Q9C098 648 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 DNAJC17Q9NVM6 304 aaKnown RBP11.72□□□□□ -0.53
DDX39A-210ENST00000589675 ARMCX3Q9UH62 379 aaPredicted RBP11.72□□□□□ -0.53
DDX39A-210ENST00000589675 HCN2Q9UL51 889 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 KIAA1257Q9ULG3 409 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 INVSQ9Y283 1065 aa11.72□□□□□ -0.53
DDX39A-210ENST00000589675 MAP1BP46821 2468 aaKnown RBP11.71□□□□□ -0.53
DDX39A-210ENST00000589675 ASCC3Q8N3C0 2202 aaKnown RBP11.71□□□□□ -0.53
DDX39A-210ENST00000589675 NEDD8-MDP1E9PL57 170 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 GFRA2O00451 464 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 BCKDHBP21953 392 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 CHKAP35790 457 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 PPP1R2P41236 205 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 YWHAEP62258 255 aaKnown RBP11.71□□□□□ -0.53
DDX39A-210ENST00000589675 CUL2Q13617 745 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 MAP7D1Q3KQU3 841 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 RNF43Q68DV7 783 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 FOXR2Q6PJQ5 311 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 LPCAT2Q7L5N7 544 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 CYP2U1Q7Z449 544 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 PIGZQ86VD9 579 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 SMARCE1Q969G3 411 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 SLC35C1Q96A29 364 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 DHTKD1Q96HY7 919 aaPredicted RBP11.71□□□□□ -0.53
DDX39A-210ENST00000589675 ARID3AQ99856 593 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 GABRG3Q99928 467 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 SMOC1Q9H4F8 434 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 METTL14Q9HCE5 456 aaKnown RBP11.71□□□□□ -0.53
DDX39A-210ENST00000589675 CD248Q9HCU0 757 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 BCCIPQ9P287 314 aaKnown RBP eCLIP11.71□□□□□ -0.53
DDX39A-210ENST00000589675 EVLQ9UI08 416 aaPredicted RBP11.71□□□□□ -0.53
DDX39A-210ENST00000589675 SLC27A6Q9Y2P4 619 aa11.71□□□□□ -0.53
DDX39A-210ENST00000589675 PCNX2A6NKB5 2137 aa11.71□□□□□ -0.54
DDX39A-210ENST00000589675 CACNA1EQ15878 2313 aa11.7□□□□□ -0.54
DDX39A-210ENST00000589675 A0A1W2PQF6 199 aa11.7□□□□□ -0.54
DDX39A-210ENST00000589675 TCRBV21S2A2A0A5A6 115 aa11.7□□□□□ -0.54
DDX39A-210ENST00000589675 LNP1A1A4G5 178 aa11.7□□□□□ -0.54
DDX39A-210ENST00000589675 PRRT4C9JH25 899 aa11.7□□□□□ -0.54
DDX39A-210ENST00000589675 XPO1O14980 1071 aaKnown RBP11.7□□□□□ -0.54
DDX39A-210ENST00000589675 KHNYNO15037 678 aaKnown RBP11.7□□□□□ -0.54
DDX39A-210ENST00000589675 NPC1O15118 1278 aa11.7□□□□□ -0.54
DDX39A-210ENST00000589675 MDM4O15151 490 aa11.7□□□□□ -0.54
DDX39A-210ENST00000589675 TRIM24O15164 1050 aa11.7□□□□□ -0.54
DDX39A-210ENST00000589675 ZBED1O96006 694 aa11.7□□□□□ -0.54
DDX39A-210ENST00000589675 PENKP01210 267 aaPredicted RBP11.7□□□□□ -0.54
DDX39A-210ENST00000589675 KLKB1P03952 638 aa11.7□□□□□ -0.54
DDX39A-210ENST00000589675 TBXAS1P24557 533 aaPredicted RBP11.7□□□□□ -0.54
DDX39A-210ENST00000589675 HOXD12P35452 270 aa11.7□□□□□ -0.54
DDX39A-210ENST00000589675 DGKGP49619 791 aa11.7□□□□□ -0.54
DDX39A-210ENST00000589675 ZNF132P52740 706 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms