RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 CLSTN2Q9H4D0 955 aa11.14□□□□□ -0.63
CLPTM1-211ENST00000589347 OLA1Q9NTK5 396 aaKnown RBP11.14□□□□□ -0.63
CLPTM1-211ENST00000589347 RASAL2Q9UJF2 1139 aa11.14□□□□□ -0.63
CLPTM1-211ENST00000589347 STRIP2Q9ULQ0 834 aa11.14□□□□□ -0.63
CLPTM1-211ENST00000589347 ZNF510Q9Y2H8 683 aa11.14□□□□□ -0.63
CLPTM1-211ENST00000589347 AKAP13Q12802 2813 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 NYNRINQ9P2P1 1898 aaKnown RBP11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 CCDC163A0A0D9SF12 145 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 GOLGA6L22H0YM25 854 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 K7ESF4 209 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 SCAMP3O14828 347 aaKnown RBP11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 HOXC11O43248 304 aaPredicted RBP11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 PROS1P07225 676 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 BMP6P22004 513 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 PLA2G4AP47712 749 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 FNTBP49356 437 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 ZXDBP98169 803 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 GCNT1Q02742 428 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 ANO4Q32M45 955 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 HSF5Q4G112 596 aaPredicted RBP11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 HEATR6Q6AI08 1181 aaKnown RBP11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 PRR23CQ6ZRP0 262 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 PIGZQ86VD9 579 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 ZNF276Q8N554 614 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 XPO6Q96QU8 1125 aaKnown RBP11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 PNKPQ96T60 521 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 DCLK3Q9C098 648 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 LINC00597Q9H2U6 94 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 USP3Q9Y6I4 520 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 FREM2Q5SZK8 3169 aa11.13□□□□□ -0.63
CLPTM1-211ENST00000589347 SMG1Q96Q15 3661 aaKnown RBP11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 M0QYV0 167 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 KAT7O95251 611 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 APBB3O95704 486 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 ZBED1O96006 694 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 RETP07949 1114 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 OPRD1P41143 372 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 MTIF2P46199 727 aaKnown RBP11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 TKTL1P51854 596 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 SEC13P55735 322 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 YWHAGP61981 247 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 MRPS21P82921 87 aaKnown RBP11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 COG7P83436 770 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 KDSRQ06136 332 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 SIM2Q14190 667 aaPredicted RBP11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 DMC1Q14565 340 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 RAB41Q5JT25 222 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 LY6G5CQ5SRR4 150 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 HTR3DQ70Z44 454 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 ENOSF1Q7L5Y1 443 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 SYT13Q7L8C5 426 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 TRMT11Q7Z4G4 463 aaKnown RBP11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 TTC30AQ86WT1 665 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 MIB1Q86YT6 1006 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 CREBRFQ8IUR6 639 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 BBS7Q8IWZ6 715 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 ADGRG2Q8IZP9 1017 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 UBR7Q8N806 425 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 RBBP8NLQ8NC74 664 aaPredicted RBP11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 GOLGA1Q92805 767 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 KLF16Q9BXK1 252 aaPredicted RBP11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 INTS2Q9H0H0 1204 aaKnown RBP11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 NMUR1Q9HB89 426 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 ARHGEF4Q9NR80 690 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 SPHK2Q9NRA0 654 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 SEMA4GQ9NTN9 838 aa11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 TNRC6BQ9UPQ9 1833 aaKnown RBP11.12□□□□□ -0.63
CLPTM1-211ENST00000589347 CKAP5Q14008 2032 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 O00370 1275 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 MED7O43513 233 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 ALDH1A2O94788 518 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 KRT5P13647 590 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 PRKCSHP14314 528 aaPredicted RBP11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 GRIA2P42262 883 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 LIMK1P53667 647 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 MFAP3P55082 362 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 PDE4CQ08493 712 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 ADIGQ0VDE8 80 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 EFEMP1Q12805 493 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 CSRP2Q16527 193 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 EOGTQ5NDL2 527 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 N4BP2L1Q5TBK1 243 aaPredicted RBP11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 NAIF1Q69YI7 327 aaPredicted RBP11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 GRAMD4Q6IC98 578 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 PKN3Q6P5Z2 889 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 RHBDF2Q6PJF5 856 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 LCLAT1Q6UWP7 414 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 GBP6Q6ZN66 633 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 C11orf74Q86VG3 221 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 EHBP1Q8NDI1 1231 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 TSTD1Q8NFU3 115 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 RNF139Q8WU17 664 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 GAB3Q8WWW8 586 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 PLD4Q96BZ4 506 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 HHIPQ96QV1 700 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 ULBP1Q9BZM6 244 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 THAP9Q9H5L6 903 aa11.11□□□□□ -0.63
CLPTM1-211ENST00000589347 CNGB3Q9NQW8 809 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms