RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 KLHDC10Q6PID8 442 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 C1orf228Q6PIY5 440 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 SASS6Q6UVJ0 657 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 ENOSF1Q7L5Y1 443 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 ASCL5Q7RTU5 278 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 APTXQ7Z2E3 356 aaKnown RBP10.35□□□□□ -0.75
PTPN2-208ENST00000589216 PASD1Q8IV76 773 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 ETFBKMTQ8IXQ9 262 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 ADGRG2Q8IZP9 1017 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 SIX6OS1Q8N1H7 587 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 PHTF2Q8N3S3 785 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 AOPEPQ8N6M6 819 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 NELL1Q92832 810 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 CD101Q93033 1021 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 LSM14BQ9BX40 385 aaKnown RBP10.35□□□□□ -0.75
PTPN2-208ENST00000589216 VPS16Q9H269 839 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 GANQ9H2C0 597 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 PLCB1Q9NQ66 1216 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 ANO10Q9NW15 660 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 DNMT3LQ9UJW3 386 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 KIAA1257Q9ULG3 409 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 MYO18AQ92614 2054 aaKnown RBP10.35□□□□□ -0.75
PTPN2-208ENST00000589216 CFAP54Q96N23 3096 aa10.35□□□□□ -0.75
PTPN2-208ENST00000589216 PRR23AA6NEV1 266 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 E5RJQ4 531 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 PROB1E7EW31 1015 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 FOXN3O00409 490 aaPredicted RBP10.34□□□□□ -0.75
PTPN2-208ENST00000589216 SLC9A3R1O14745 358 aaPredicted RBP10.34□□□□□ -0.75
PTPN2-208ENST00000589216 HOXC11O43248 304 aaPredicted RBP10.34□□□□□ -0.75
PTPN2-208ENST00000589216 ATP1A3P13637 1013 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 ZNF18P17022 549 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 CLCN1P35523 988 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 RPL34P49207 117 aaKnown RBP10.34□□□□□ -0.75
PTPN2-208ENST00000589216 PSEN1P49768 467 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 SEC13P55735 322 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 SLC8A3P57103 927 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 MYL5Q02045 173 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 GRSF1Q12849 480 aaKnown RBP eCLIP10.34□□□□□ -0.75
PTPN2-208ENST00000589216 STILQ15468 1287 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 ANO6Q4KMQ2 910 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 DGKKQ5KSL6 1271 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 BSPRYQ5W0U4 402 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 HTR3DQ70Z44 454 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 RSRC2Q7L4I2 434 aaKnown RBP10.34□□□□□ -0.75
PTPN2-208ENST00000589216 SLC47A2Q86VL8 602 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 TMEM25Q86YD3 366 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 SPEM1Q8N4L4 309 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 KIAA1958Q8N8K9 716 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 RPLP0P6Q8NHW5 317 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 ZNF606Q8WXB4 792 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 BHMTQ93088 406 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 FUCA2Q9BTY2 467 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 NAA15Q9BXJ9 866 aaKnown RBP10.34□□□□□ -0.75
PTPN2-208ENST00000589216 MIS12Q9H081 205 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 ZDHHC4Q9NPG8 344 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 CNGB3Q9NQW8 809 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 SPHK2Q9NRA0 654 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 MARCH2Q9P0N8 246 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 SFMBT1Q9UHJ3 866 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 FBXO4Q9UKT5 387 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 SPAG17Q6Q759 2223 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 CEP250Q9BV73 2442 aa10.34□□□□□ -0.75
PTPN2-208ENST00000589216 SLC12A8A0AV02 714 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 NEDD8-MDP1E9PL57 170 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 F8VZ95 297 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 K7EQS6 105 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 PAPSS1O43252 624 aaPredicted RBP10.33□□□□□ -0.76
PTPN2-208ENST00000589216 ADH1CP00326 375 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 LTFP02788 710 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 FYNP06241 537 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 RALAP11233 206 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 UCHL3P15374 230 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 CORO1AP31146 461 aaKnown RBP10.33□□□□□ -0.76
PTPN2-208ENST00000589216 CCR3P51677 355 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 COPB1P53618 953 aaKnown RBP10.33□□□□□ -0.76
PTPN2-208ENST00000589216 PITX1P78337 314 aaPredicted RBP10.33□□□□□ -0.76
PTPN2-208ENST00000589216 PDCLQ13371 301 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 RAPGEF1Q13905 1077 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 DRAP1Q14919 205 aaPredicted RBP10.33□□□□□ -0.76
PTPN2-208ENST00000589216 MEA1Q16626 185 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 ZNF528Q3MIS6 628 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 KLHDC7AQ5VTJ3 777 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 BTBD8Q5XKL5 378 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 MSANTD2Q6P1R3 559 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 TPGS1Q6ZTW0 290 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 FAM71AQ8IYT1 594 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 SCML4Q8N228 414 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 ARHGAP18Q8N392 663 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 ZNF276Q8N554 614 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 WDTC1Q8N5D0 677 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 NAT16Q8N8M0 369 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 C1orf131Q8NDD1 294 aaKnown RBP10.33□□□□□ -0.76
PTPN2-208ENST00000589216 OTUB2Q96DC9 234 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 CPXM1Q96SM3 734 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 IER2Q9BTL4 223 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 SLC4A5Q9BY07 1137 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 ST7Q9NRC1 585 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 PLK2Q9NYY3 685 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 TBC1D14Q9P2M4 693 aa10.33□□□□□ -0.76
PTPN2-208ENST00000589216 SIK3Q9Y2K2 1263 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms