RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 PPIGQ13427 754 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCBE1-203ENST00000589116 TFDP2Q14188 446 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 DPYSL3Q14195 570 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 KRT81Q14533 505 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 DPYSL2Q16555 572 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 RAB6CQ53S08 254 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 RTP2Q5QGT7 225 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 OTUD1Q5VV17 481 aaPredicted RBP12.57□□□□□ -0.4
CCBE1-203ENST00000589116 DUPD1Q68J44 220 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 HFE2Q6ZVN8 426 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 ATL2Q8NHH9 583 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 BCL7CQ8WUZ0 217 aaPredicted RBP12.57□□□□□ -0.4
CCBE1-203ENST00000589116 PIK3R5Q8WYR1 880 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 NDRG1Q92597 394 aaKnown RBP12.57□□□□□ -0.4
CCBE1-203ENST00000589116 ZNF558Q96NG5 402 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 CALN1Q9BXU9 219 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 ADAM33Q9BZ11 813 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 FAM129AQ9BZQ8 928 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 RAB6CQ9H0N0 254 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 TMEM51Q9NW97 253 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 R3HDM2Q9Y2K5 976 aaKnown RBP12.57□□□□□ -0.4
CCBE1-203ENST00000589116 BACE2Q9Y5Z0 518 aa12.57□□□□□ -0.4
CCBE1-203ENST00000589116 ESYT3A0FGR9 886 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 APOC4-APOC2K7ER74 178 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 M0QYT0 321 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 LIASO43766 372 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 APOC2P02655 101 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 FYNP06241 537 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 CD48P09326 243 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 CARSP49589 748 aaKnown RBP12.56□□□□□ -0.4
CCBE1-203ENST00000589116 CDR1P51861 262 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 RABGGTBP53611 331 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 DEUP1Q05D60 604 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 ADCY2Q08462 1091 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 KCNT2Q6UVM3 1135 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 HDXQ7Z353 690 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 RFX6Q8HWS3 928 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 SCN4BQ8IWT1 228 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 ATG4AQ8WYN0 398 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 NKD2Q969F2 451 aaPredicted RBP12.56□□□□□ -0.4
CCBE1-203ENST00000589116 CAVIN3Q969G5 261 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 FAF2Q96CS3 445 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 TRIM51Q9BSJ1 452 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 FBXO44Q9H4M3 255 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 PLEKHA4Q9H4M7 779 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 PRDM16Q9HAZ2 1276 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 PCDH18Q9HCL0 1135 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 RCOR3Q9P2K3 495 aaPredicted RBP12.56□□□□□ -0.4
CCBE1-203ENST00000589116 MTRRQ9UBK8 725 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 PRKAG2Q9UGJ0 569 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 AP4E1Q9UPM8 1137 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 NAALADL1Q9UQQ1 740 aa12.56□□□□□ -0.4
CCBE1-203ENST00000589116 PTPRSQ13332 1948 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 MTMR11A4FU01 709 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 CST8O60676 142 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 F9P00740 461 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 SOD2P04179 222 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 NCAM1P13591 858 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 KCNJ1P48048 391 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 SNX1Q13596 522 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 PTK6Q13882 451 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 BYSLQ13895 437 aaKnown RBP12.55□□□□□ -0.4
CCBE1-203ENST00000589116 BTG3Q14201 252 aaPredicted RBP12.55□□□□□ -0.4
CCBE1-203ENST00000589116 PPP1R7Q15435 360 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 SPOUT1Q5T280 376 aaKnown RBP12.55□□□□□ -0.4
CCBE1-203ENST00000589116 SYPL2Q5VXT5 272 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 SLC8B1Q6J4K2 584 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 GSPT2Q8IYD1 628 aaKnown RBP12.55□□□□□ -0.4
CCBE1-203ENST00000589116 NUP93Q8N1F7 819 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 SLC39A11Q8N1S5 342 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 CCHCR1Q8TD31 782 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 IFT81Q8WYA0 676 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 NTAN1Q96AB6 310 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 TMEM169Q96HH4 297 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 B3GALT6Q96L58 329 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 CEP295NLQ96MC4 621 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 RNF157Q96PX1 679 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 MAK16Q9BXY0 300 aaKnown RBP12.55□□□□□ -0.4
CCBE1-203ENST00000589116 FUT8Q9BYC5 575 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 ABCC13Q9NSE7 274 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 COMMD8Q9NX08 183 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 STK39Q9UEW8 545 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 FZD10Q9ULW2 581 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 NFU1Q9UMS0 254 aa12.55□□□□□ -0.4
CCBE1-203ENST00000589116 DRG1Q9Y295 367 aaKnown RBP12.55□□□□□ -0.4
CCBE1-203ENST00000589116 MAP2K7O14733 419 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 DAPK3O43293 454 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 ITGAVP06756 1048 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 TGM2P21980 687 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 PPM1AP35813 382 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 VCPP55072 806 aaKnown RBP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 KRT17Q04695 432 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 SCAPQ12770 1279 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 HLTFQ14527 1009 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 PSMD5Q16401 504 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 ZC3H12AQ5D1E8 599 aaKnown RBP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 BSPRYQ5W0U4 402 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 FAM131BQ86XD5 332 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 ARHGAP18Q8N392 663 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 FBXO22Q8NEZ5 403 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms