RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 EPS15L1Q9UBC2 864 aa11.2□□□□□ -0.62
SMARCA4-213ENST00000587988 MYO1AQ9UBC5 1043 aa11.2□□□□□ -0.62
SMARCA4-213ENST00000587988 CNOT8Q9UFF9 292 aaKnown RBP11.2□□□□□ -0.62
SMARCA4-213ENST00000587988 STRIP2Q9ULQ0 834 aa11.2□□□□□ -0.62
SMARCA4-213ENST00000587988 NR2E1Q9Y466 385 aa11.2□□□□□ -0.62
SMARCA4-213ENST00000587988 EPN1Q9Y6I3 576 aaPredicted RBP11.2□□□□□ -0.62
SMARCA4-213ENST00000587988 NUP210Q8TEM1 1887 aaPredicted RBP11.2□□□□□ -0.62
SMARCA4-213ENST00000587988 ANKRD62A6NC57 917 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 SIGLEC16A6NMB1 481 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 CAPN9O14815 690 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 HSF2BPO75031 334 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 DAB1O75553 588 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 NDUFA10O95299 355 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 LCA5LO95447 670 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 CKMP06732 381 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 PFKLP17858 780 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 TFE3P19532 575 aaPredicted RBP11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 WEE1P30291 646 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 RFC1P35251 1148 aaPredicted RBP11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 CYLC1P35663 651 aaPredicted RBP11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 AVPR1AP37288 418 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 RPL7AP62424 266 aaKnown RBP11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 SLC7A9P82251 487 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 ZP2Q05996 745 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 MAMLD1Q13495 774 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 DCAF6Q58WW2 860 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 MSANTD2Q6P1R3 559 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 DNAJC24Q6P3W2 148 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 KLHDC10Q6PID8 442 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 RSRC2Q7L4I2 434 aaKnown RBP11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 BEND5Q7L4P6 421 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 MIB1Q86YT6 1006 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 ADAM32Q8TC27 787 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 ADAMTS19Q8TE59 1207 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 RNF139Q8WU17 664 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 RSAD2Q8WXG1 361 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 GOLGA1Q92805 767 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 SMARCD2Q92925 531 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 WBP2Q969T9 261 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 ACSF2Q96CM8 615 aaPredicted RBP11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 SELENOOQ9BVL4 669 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 KLF16Q9BXK1 252 aaPredicted RBP11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 GKN1Q9NS71 199 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 TDP1Q9NUW8 608 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 SMPD4Q9NXE4 827 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 LIMD1Q9UGP4 676 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 ZMYM5Q9UJ78 669 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 RASAL2Q9UJF2 1139 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 DNMT3LQ9UJW3 386 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 TFR2Q9UP52 801 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 REXO2Q9Y3B8 237 aaKnown RBP11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 CPQQ9Y646 472 aa11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 ZFP37Q9Y6Q3 630 aaPredicted RBP11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 HELZP42694 1942 aaKnown RBP11.19□□□□□ -0.62
SMARCA4-213ENST00000587988 C2CD4BA6NLJ0 364 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 EIF3CLB5ME19 914 aaKnown RBP11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 LOC730098B7Z3J9 87 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 ANHXE9PGG2 379 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 LEFTY2O00292 366 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 MSI1O43347 362 aaKnown RBP11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 CYP1A2P05177 515 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 HMBSP08397 361 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 H2AFZP0C0S5 128 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 MYBL1P10243 752 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 KRT3P12035 628 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 NOS2P35228 1153 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 MATKP42679 507 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 MAGEA1P43355 309 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 GPC5P78333 572 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 CCZ1BP86790 482 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 CCZ1P86791 482 aaPredicted RBP11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 OGDHQ02218 1023 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 RAB6CQ53S08 254 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 OTUD1Q5VV17 481 aaPredicted RBP11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 H2AFVQ71UI9 128 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 TADA2BQ86TJ2 420 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 TAC4Q86UU9 113 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 ADHFE1Q8IWW8 467 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 ZDHHC14Q8IZN3 488 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 ACRBPQ8NEB7 543 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 TTC16Q8NEE8 873 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 DQX1Q8TE96 717 aaKnown RBP11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 RXFP2Q8WXD0 754 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 TRIM11Q96F44 468 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 CFAP57Q96MR6 1250 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 MCEEQ96PE7 176 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 CDK5RAP1Q96SZ6 601 aaKnown RBP11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 EIF3CQ99613 913 aaKnown RBP11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 KXD1Q9BQD3 176 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 DDX23Q9BUQ8 820 aaKnown RBP11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 TRIM7Q9C029 511 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 NACA2Q9H009 215 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 RAB6CQ9H0N0 254 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 TRPV4Q9HBA0 871 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 OLA1Q9NTK5 396 aaKnown RBP11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 PARVAQ9NVD7 372 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 MARCH2Q9P0N8 246 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 CALCOCO1Q9P1Z2 691 aa11.18□□□□□ -0.62
SMARCA4-213ENST00000587988 PRKAG3Q9UGI9 489 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms