RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 NR1H4Q96RI1 486 aaPredicted RBP19.26■□□□□ 0.67
DDX39A-206ENST00000587730 EBNA1BP2Q99848 306 aaKnown RBP19.26■□□□□ 0.67
DDX39A-206ENST00000587730 C12orf65Q9H3J6 166 aaKnown RBP19.26■□□□□ 0.67
DDX39A-206ENST00000587730 SMYD3Q9H7B4 428 aa19.26■□□□□ 0.67
DDX39A-206ENST00000587730 PPARGC1AQ9UBK2 798 aaKnown RBP19.26■□□□□ 0.67
DDX39A-206ENST00000587730 SCAF8Q9UPN6 1271 aaKnown RBP19.26■□□□□ 0.67
DDX39A-206ENST00000587730 AFG3L2Q9Y4W6 797 aa19.26■□□□□ 0.67
DDX39A-206ENST00000587730 FAM237BA0A1B0GVD1 139 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 MAGEA13PA6NCF6 341 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 SLC15A5A6NIM6 579 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 CSDE1O75534 798 aaKnown RBP19.25■□□□□ 0.67
DDX39A-206ENST00000587730 KRT36O76013 467 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 BPGMP07738 259 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 CXCL8P10145 99 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 MLNP12872 115 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 SDC4P31431 198 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 AP2B1P63010 937 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 MMRN1Q13201 1228 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 CHI3L2Q15782 390 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 OR6B2Q6IFH4 312 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 C1orf228Q6PIY5 440 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 NPNTQ6UXI9 565 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 PRPF39Q86UA1 669 aaKnown RBP19.25■□□□□ 0.67
DDX39A-206ENST00000587730 CAND1Q86VP6 1230 aaKnown RBP19.25■□□□□ 0.67
DDX39A-206ENST00000587730 SCUBE1Q8IWY4 988 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 ATP2A3Q93084 1043 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 KLRG1Q96E93 195 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 ACAP3Q96P50 834 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 ZNF184Q99676 751 aaPredicted RBP19.25■□□□□ 0.67
DDX39A-206ENST00000587730 GPR20Q99678 358 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 SMARCAD1Q9H4L7 1026 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 GBA2Q9HCG7 927 aaPredicted RBP19.25■□□□□ 0.67
DDX39A-206ENST00000587730 HBP1O60381 514 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 FKBP6O75344 327 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 EGFRP00533 1210 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 ITGB3P05106 788 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 APRTP07741 180 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 MYL4P12829 197 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 CDH8P55286 799 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 RBP5P82980 135 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 MBTD1Q05BQ5 628 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 STX3Q13277 289 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 TMEM154Q6P9G4 183 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 SESTD1Q86VW0 696 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 WDR75Q8IWA0 830 aaKnown RBP19.25■□□□□ 0.67
DDX39A-206ENST00000587730 HACE1Q8IYU2 909 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 HPDLQ96IR7 371 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 TRAPPC9Q96Q05 1148 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 NT5C1AQ9BXI3 368 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 PCDH18Q9HCL0 1135 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 PDP2Q9P2J9 529 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 C2CD2Q9Y426 696 aa19.25■□□□□ 0.67
DDX39A-206ENST00000587730 HBS1LQ9Y450 684 aaKnown RBP19.25■□□□□ 0.67
DDX39A-206ENST00000587730 LCTP09848 1927 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 DPPA5A6NC42 116 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 ZBTB42B2RXF5 422 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 TBX10O75333 385 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 PIAS1O75925 651 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 KLHL2O95198 593 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 NFICP08651 508 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 STAG3L1P0CL83 205 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 AOC1P19801 751 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 GMPSP49915 693 aaPredicted RBP19.24■□□□□ 0.67
DDX39A-206ENST00000587730 SESN3P58005 492 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 MRPS5P82675 430 aaKnown RBP19.24■□□□□ 0.67
DDX39A-206ENST00000587730 CELF3Q5SZQ8 465 aaKnown RBP19.24■□□□□ 0.67
DDX39A-206ENST00000587730 AAGABQ6PD74 315 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 UNC5AQ6ZN44 842 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 FAM183BPQ6ZVS7 135 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 ADGRG6Q86SQ4 1221 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 IFNLR1Q8IU57 520 aaPredicted RBP19.24■□□□□ 0.67
DDX39A-206ENST00000587730 ARID3BQ8IVW6 561 aaPredicted RBP19.24■□□□□ 0.67
DDX39A-206ENST00000587730 DHX37Q8IY37 1157 aaKnown RBP19.24■□□□□ 0.67
DDX39A-206ENST00000587730 TWNKQ96RR1 684 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 NAT9Q9BTE0 207 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 PCDHA11Q9Y5I1 949 aa19.24■□□□□ 0.67
DDX39A-206ENST00000587730 LACTBL1A8MY62 500 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 SKAP2O75563 359 aaPredicted RBP19.23■□□□□ 0.67
DDX39A-206ENST00000587730 PDHA1P08559 390 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 RBL1P28749 1068 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 SCNN1AP37088 669 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 CCNHP51946 323 aaPredicted RBP19.23■□□□□ 0.67
DDX39A-206ENST00000587730 ACTR3P61158 418 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 THOC5Q13769 683 aaKnown RBP19.23■□□□□ 0.67
DDX39A-206ENST00000587730 EEF1DP3Q658K8 133 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 NDUFAF2Q8N183 169 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 LRRC71Q8N4P6 559 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 PQLC3Q8N755 202 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 CXorf38Q8TB03 319 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 CDKL2Q92772 493 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 NLRP4Q96MN2 994 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 FAM161BQ96MY7 647 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 FERMT1Q9BQL6 677 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 FAM192AQ9GZU8 254 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 ARHGEF4Q9NR80 690 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 DDX43Q9NXZ2 648 aaKnown RBP19.23■□□□□ 0.67
DDX39A-206ENST00000587730 SOWAHBA6NEL2 793 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 HACD1B0YJ81 288 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 H3BRJ5 948 aa19.23■□□□□ 0.67
DDX39A-206ENST00000587730 AVILO75366 819 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms