RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 KLHL40Q2TBA0 621 aa15.52■□□□□ 0.08
ATG4D-207ENST00000587256 ANO4Q32M45 955 aa15.52■□□□□ 0.08
ATG4D-207ENST00000587256 KLHDC7AQ5VTJ3 777 aa15.52■□□□□ 0.08
ATG4D-207ENST00000587256 BSPRYQ5W0U4 402 aa15.52■□□□□ 0.08
ATG4D-207ENST00000587256 RHBDF2Q6PJF5 856 aa15.52■□□□□ 0.08
ATG4D-207ENST00000587256 TSSK4Q6SA08 328 aa15.52■□□□□ 0.08
ATG4D-207ENST00000587256 HTR3DQ70Z44 454 aa15.52■□□□□ 0.08
ATG4D-207ENST00000587256 PASD1Q8IV76 773 aa15.52■□□□□ 0.08
ATG4D-207ENST00000587256 MAML2Q8IZL2 1156 aaPredicted RBP15.52■□□□□ 0.08
ATG4D-207ENST00000587256 CLEC4CQ8WTT0 213 aa15.52■□□□□ 0.08
ATG4D-207ENST00000587256 IRGQQ8WZA9 623 aa15.52■□□□□ 0.08
ATG4D-207ENST00000587256 FBRSL1Q9HCM7 1045 aaKnown RBP15.52■□□□□ 0.08
ATG4D-207ENST00000587256 ABCC13Q9NSE7 274 aa15.52■□□□□ 0.08
ATG4D-207ENST00000587256 PIEZO1Q92508 2521 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 CACNA1IQ9P0X4 2223 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.51■□□□□ 0.07
ATG4D-207ENST00000587256 FOXN3O00409 490 aaPredicted RBP15.51■□□□□ 0.07
ATG4D-207ENST00000587256 GREM1O60565 184 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 RNF40O75150 1001 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 LTFP02788 710 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 UCHL3P15374 230 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 NBL1P41271 181 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 ACADSBP45954 432 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 CXCL12P48061 93 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 SATB1Q01826 763 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 KDSRQ06136 332 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 PDCLQ13371 301 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 DRAP1Q14919 205 aaPredicted RBP15.51■□□□□ 0.07
ATG4D-207ENST00000587256 GAB4Q2WGN9 574 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 ZNF528Q3MIS6 628 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 FBXO43Q4G163 708 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 SMYD5Q6GMV2 418 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 FAM149B1Q96BN6 582 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 PCMTD1Q96MG8 357 aaPredicted RBP15.51■□□□□ 0.07
ATG4D-207ENST00000587256 DCLK3Q9C098 648 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 SPHK2Q9NRA0 654 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 FAM207AQ9NSI2 230 aaPredicted RBP15.51■□□□□ 0.07
ATG4D-207ENST00000587256 CEP83Q9Y592 693 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 R4GN57 208 aa15.51■□□□□ 0.07
ATG4D-207ENST00000587256 LGALS16A8MUM7 142 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 E5RJQ4 531 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 HOXC11O43248 304 aaPredicted RBP15.5■□□□□ 0.07
ATG4D-207ENST00000587256 GABBR2O75899 941 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 CORO1AP31146 461 aaKnown RBP15.5■□□□□ 0.07
ATG4D-207ENST00000587256 KRT9P35527 623 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 EIF2DP41214 584 aaKnown RBP15.5■□□□□ 0.07
ATG4D-207ENST00000587256 KLK7P49862 253 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 BPIFB4P59827 614 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 NCAPHQ15003 741 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 DPY19L2P1Q6NXN4 242 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 Q6ZNB5 142 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 TPGS1Q6ZTW0 290 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 SLC47A2Q86VL8 602 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 C12orf40Q86WS4 652 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 FMNL3Q8IVF7 1028 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 FAM71AQ8IYT1 594 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 CCDC26Q8TAB7 109 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 STK32AQ8WU08 396 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 PLD4Q96BZ4 506 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 NOX5Q96PH1 765 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 PNKPQ96T60 521 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 BBS2Q9BXC9 721 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 PDCL3Q9H2J4 239 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 PLCB1Q9NQ66 1216 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 ARHGEF4Q9NR80 690 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 LIMA1Q9UHB6 759 aaKnown RBP15.5■□□□□ 0.07
ATG4D-207ENST00000587256 CYTH4Q9UIA0 394 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 ZNF510Q9Y2H8 683 aa15.5■□□□□ 0.07
ATG4D-207ENST00000587256 SYCE3A1L190 88 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 NEDD8-MDP1E9PL57 170 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 F8VZ95 297 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 MSI1O43347 362 aaKnown RBP15.49■□□□□ 0.07
ATG4D-207ENST00000587256 ATG13O75143 517 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 APODP05090 189 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 ZNF18P17022 549 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 CLCN1P35523 988 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 SLC6A11P48066 632 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 MRE11P49959 708 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 SEC13P55735 322 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 PKN3Q6P5Z2 889 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 MAMSTRQ6ZN01 415 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 ALYREFQ86V81 257 aaKnown RBP15.49■□□□□ 0.07
ATG4D-207ENST00000587256 TMEM25Q86YD3 366 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 DENND1CQ8IV53 801 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 NAT16Q8N8M0 369 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 C1orf131Q8NDD1 294 aaKnown RBP15.49■□□□□ 0.07
ATG4D-207ENST00000587256 RPLP0P6Q8NHW5 317 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 IPO4Q8TEX9 1081 aaKnown RBP15.49■□□□□ 0.07
ATG4D-207ENST00000587256 EZH1Q92800 747 aaPredicted RBP15.49■□□□□ 0.07
ATG4D-207ENST00000587256 NKD2Q969F2 451 aaPredicted RBP15.49■□□□□ 0.07
ATG4D-207ENST00000587256 ACDQ96AP0 544 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 BPIFA3Q9BQP9 254 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 TRIM62Q9BVG3 475 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 NAA15Q9BXJ9 866 aaKnown RBP15.49■□□□□ 0.07
ATG4D-207ENST00000587256 SLC4A5Q9BY07 1137 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 GANQ9H2C0 597 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 SFMBT1Q9UHJ3 866 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 PCDHGC3Q9UN70 934 aa15.49■□□□□ 0.07
ATG4D-207ENST00000587256 HBS1LQ9Y450 684 aaKnown RBP15.49■□□□□ 0.07
ATG4D-207ENST00000587256 SMTNL1A8MU46 457 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms