RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 SEMA4FO95754 770 aa13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 ITGB2P05107 769 aa13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 TYRP14679 529 aa13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 POU3F2P20265 443 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 ANXA13P27216 316 aa13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 EPHA8P29322 1005 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 ARRB1P49407 418 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 DGKGP49619 791 aa13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 COPAP53621 1224 aa13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 RACK1P63244 317 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 FOXK1P85037 733 aa13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 BLOC1S2Q6QNY1 142 aa13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 JAKMIP1Q96N16 626 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 PHF12Q96QT6 1004 aa13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 CCNL2Q96S94 520 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 TTLL2Q9BWV7 592 aa13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 AGXT2Q9BYV1 514 aa13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 TRIM9Q9C026 710 aa13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 C17orf75Q9HAS0 396 aa13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 DERAQ9Y315 318 aa13.48□□□□□ -0.25
SMARCA4-211ENST00000586921 PTPRJQ12913 1337 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 NPC1O15118 1278 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 OGTO15294 1046 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 FAM189A1O60320 539 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 RBMS1P29558 406 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 ASIC1P78348 528 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 SKOR1P84550 965 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 NR5A1Q13285 461 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 IGFBP7Q16270 282 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 HAUS3Q68CZ6 603 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 CPLX2Q6PUV4 134 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 C4orf50Q6ZRC1 276 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 USP53Q70EK8 1073 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 TMEM161BQ8NDZ6 487 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 CEP295NLQ96MC4 621 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 ZNF560Q96MR9 790 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 DUSP9Q99956 384 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 EPN3Q9H201 632 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 GDF3Q9NR23 364 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 GJB4Q9NTQ9 266 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 WDR70Q9NW82 654 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 DPP3Q9NY33 737 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 LRWD1Q9UFC0 647 aa13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 SETD2Q9BYW2 2564 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-211ENST00000586921 CKAP5Q14008 2032 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 MYH10P35580 1976 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 WNT7AO00755 349 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 CSO75390 466 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 MAPTP10636 758 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 MUTP22033 750 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 PCSK1P29120 753 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 CDH8P55286 799 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 EVCP57679 992 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 TAF10Q12962 218 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 MAPK7Q13164 816 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 CLN3Q13286 438 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 SFMBT2Q5VUG0 894 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 IGF2-ASQ6U949 168 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 VSTM1Q6UX27 236 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 TPGS1Q6ZTW0 290 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 SLC6A18Q96N87 628 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 SLITRK1Q96PX8 696 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 ORAI3Q9BRQ5 295 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 NTPCRQ9BSD7 190 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 BTBD1Q9H0C5 482 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 LHX5Q9H2C1 402 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 TMEM60Q9H2L4 133 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 WDR35Q9P2L0 1181 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 L1RE1Q9UN81 338 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 C2CD2Q9Y426 696 aa13.46□□□□□ -0.25
SMARCA4-211ENST00000586921 ZFHX3Q15911 3703 aa13.46□□□□□ -0.26
SMARCA4-211ENST00000586921 SFI1A8K8P3 1242 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 COCHO43405 550 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 HUS1O60921 280 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 IRF1P10914 325 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 BDNFP23560 247 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 CCT6AP40227 531 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 PNPLA4P41247 253 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 LIG4P49917 911 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 SMTNP53814 917 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 NOP14P78316 857 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 ENPP2Q13822 863 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 ECM1Q16610 540 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 PROX2Q3B8N5 592 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 C3orf38Q5JPI3 329 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 CDCP2Q5VXM1 449 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 TMEM86AQ8N2M4 240 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 NSUN7Q8NE18 718 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 SGF29Q96ES7 293 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 RUSC1Q9BVN2 902 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 SLC25A18Q9H1K4 315 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 THAP10Q9P2Z0 257 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 MAGEC2Q9UBF1 373 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 SATB2Q9UPW6 733 aa13.45□□□□□ -0.26
SMARCA4-211ENST00000586921 PLXNA2O75051 1894 aa13.44□□□□□ -0.26
SMARCA4-211ENST00000586921 HNRNPDLO14979 420 aaKnown RBP13.44□□□□□ -0.26
SMARCA4-211ENST00000586921 HCRTO43612 131 aa13.44□□□□□ -0.26
SMARCA4-211ENST00000586921 CISD3P0C7P0 127 aa13.44□□□□□ -0.26
SMARCA4-211ENST00000586921 RPS6KB1P23443 525 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms