RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ANAPC7Q9UJX3 599 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 TTC7AQ9ULT0 858 aaPredicted RBP13.24□□□□□ -0.29
VMP1-202ENST00000585847 USP3Q9Y6I4 520 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 MUC6Q6W4X9 2439 aa13.24□□□□□ -0.29
VMP1-202ENST00000585847 TCRBV5S1A1TA0A578 114 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 FAM92AA1XBS5 289 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 TMEM191CA6NGB0 347 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 MBTPS2O43462 519 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 SPOPO43791 374 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 F11P03951 625 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 RHOP08100 348 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 KRT3P12035 628 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 CTNNA2P26232 953 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 CETN2P41208 172 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 SLC5A3P53794 718 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 EPHB3P54753 998 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 PLD1Q13393 1074 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 SLC5A9Q2M3M2 681 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 PRSS36Q5K4E3 855 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 PPP1R15BQ5SWA1 713 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 CCDC70Q6NSX1 233 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 GAREM2Q75VX8 874 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 BEND5Q7L4P6 421 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 BHLHA9Q7RTU4 235 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 POLNQ7Z5Q5 900 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 NT5DC3Q86UY8 548 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 MYRIPQ8NFW9 859 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 MAIP1Q8WWC4 291 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 TCEAL4Q96EI5 215 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 OSBPL9Q96SU4 736 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 EHD2Q9NZN4 543 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 PRKAG3Q9UGI9 489 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 ASB3Q9Y575 518 aa13.23□□□□□ -0.29
VMP1-202ENST00000585847 A0A0U1RQJ8 604 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 CTAGE15A4D2H0 777 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 EFCAB8A8MWE9 144 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 DPYSL4O14531 572 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 ATP1A1P05023 1023 aaKnown RBP13.22□□□□□ -0.29
VMP1-202ENST00000585847 CTAGE8P0CG41 777 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 CSH1P0DML2 217 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 CSH2P0DML3 217 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 SRGAP2BP0DMP2 458 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 PTPN2P17706 415 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 CTNNA1P35221 906 aaKnown RBP13.22□□□□□ -0.29
VMP1-202ENST00000585847 RGS7P49802 495 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 EFHC1Q5JVL4 640 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 CCDC181Q5TID7 509 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 DENND5BQ6ZUT9 1274 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 SLC26A9Q7LBE3 791 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 CTAGE6Q86UF2 777 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 XYLT1Q86Y38 959 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 CTAGE4Q8IX94 777 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 NUP93Q8N1F7 819 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 ACTRT1Q8TDG2 376 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 ATRIPQ8WXE1 791 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 IRGQQ8WZA9 623 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 NDRG1Q92597 394 aaKnown RBP13.22□□□□□ -0.29
VMP1-202ENST00000585847 RUBCNQ92622 972 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 TRMT2BQ96GJ1 504 aaKnown RBP13.22□□□□□ -0.29
VMP1-202ENST00000585847 ZNF512Q96ME7 567 aaPredicted RBP13.22□□□□□ -0.29
VMP1-202ENST00000585847 CPXM1Q96SM3 734 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 CORO1BQ9BR76 489 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 POMKQ9H5K3 350 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 OSGEPQ9NPF4 335 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 CNGB3Q9NQW8 809 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 COMMD8Q9NX08 183 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 USP15Q9Y4E8 981 aaPredicted RBP13.22□□□□□ -0.29
VMP1-202ENST00000585847 ALG6Q9Y672 507 aa13.22□□□□□ -0.29
VMP1-202ENST00000585847 PIEZO1Q92508 2521 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 GOLGA6L10A0A0M3HER8 536 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 FAM170AA1A519 330 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 PIK3R2O00459 728 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 HSF2BPO75031 334 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 XYLBO75191 536 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 ABL1P00519 1130 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 KRT7P08729 469 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 GJA1P17302 382 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 PCK1P35558 622 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 RWDD2BP57060 319 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 SMAD4Q13485 552 aaKnown RBP13.21□□□□□ -0.29
VMP1-202ENST00000585847 HADHQ16836 314 aaKnown RBP13.21□□□□□ -0.29
VMP1-202ENST00000585847 ELMSAN1Q6PJG2 1045 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 VSIG1Q86XK7 387 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 RHOT1Q8IXI2 618 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 SIX6OS1Q8N1H7 587 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 ITFG1Q8TB96 612 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 SHKBP1Q8TBC3 707 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 GOLGA1Q92805 767 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 TBCBQ99426 244 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 CNPY3Q9BT09 278 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 LRRC4Q9HBW1 653 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 WDR6Q9NNW5 1121 aaKnown RBP13.21□□□□□ -0.29
VMP1-202ENST00000585847 DDX56Q9NY93 547 aaKnown RBP13.21□□□□□ -0.29
VMP1-202ENST00000585847 MAGED2Q9UNF1 606 aaPredicted RBP13.21□□□□□ -0.29
VMP1-202ENST00000585847 TFR2Q9UP52 801 aa13.21□□□□□ -0.29
VMP1-202ENST00000585847 CLUHO75153 1309 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 PGRMC1O00264 195 aaKnown RBP13.2□□□□□ -0.3
VMP1-202ENST00000585847 FANCGO15287 622 aa13.2□□□□□ -0.3
VMP1-202ENST00000585847 RNF8O76064 485 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms