RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 KCTD13Q8WZ19 329 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 EZH1Q92800 747 aaPredicted RBP12.98□□□□□ -0.33
SS18-225ENST00000585121 GOLGA1Q92805 767 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 WBP2Q969T9 261 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 BBS2Q9BXC9 721 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 NUP62CLQ9H1M0 184 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 UBE2TQ9NPD8 197 aaPredicted RBP12.98□□□□□ -0.33
SS18-225ENST00000585121 MARCH2Q9P0N8 246 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 USP18Q9UMW8 372 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 A0A0A0MRY4 1105 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 NEDD8-MDP1E9PL57 170 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 M0QYV0 167 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 TULP2O00295 520 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 TULP3O75386 442 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 RPP40O75818 363 aaKnown RBP12.98□□□□□ -0.33
SS18-225ENST00000585121 STC2O76061 302 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 ALDH1A2O94788 518 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 HMBSP08397 361 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 TIE1P35590 1138 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 CHKAP35790 457 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 ID4P47928 161 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 MFAP3P55082 362 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 ADIGQ0VDE8 80 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 SRSF5Q13243 272 aaKnown RBP12.98□□□□□ -0.33
SS18-225ENST00000585121 EOGTQ5NDL2 527 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 GRAMD4Q6IC98 578 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 GBP6Q6ZN66 633 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 TPGS1Q6ZTW0 290 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 ENOSF1Q7L5Y1 443 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 TRMT11Q7Z4G4 463 aaKnown RBP12.98□□□□□ -0.33
SS18-225ENST00000585121 C12orf40Q86WS4 652 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 CCDC33Q8N5R6 958 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 GAB3Q8WWW8 586 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 KAT5Q92993 513 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 GBP4Q96PP9 640 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 CNGB3Q9NQW8 809 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 DNAJC17Q9NVM6 304 aaKnown RBP12.98□□□□□ -0.33
SS18-225ENST00000585121 MMP17Q9ULZ9 603 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 FRYLO94915 3013 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 SLC12A8A0AV02 714 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 GOLGA6L22H0YM25 854 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 MED7O43513 233 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 GREM1O60565 184 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 KLF8O95600 359 aaPredicted RBP12.97□□□□□ -0.33
SS18-225ENST00000585121 LCP1P13796 627 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 TYRP14679 529 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 BRD2P25440 801 aaKnown RBP12.97□□□□□ -0.33
SS18-225ENST00000585121 DGKEP52429 567 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 EXOC3L4Q17RC7 722 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 Q6ZNB5 142 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 ETFBKMTQ8IXQ9 262 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 SCML4Q8N228 414 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 KCNV2Q8TDN2 545 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 TFAP2BQ92481 460 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 PLD4Q96BZ4 506 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 HSFY1Q96LI6 401 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 THAP9Q9H5L6 903 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 POLMQ9NP87 494 aaPredicted RBP12.97□□□□□ -0.33
SS18-225ENST00000585121 ABCC13Q9NSE7 274 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 POLR3BQ9NW08 1133 aaPredicted RBP12.97□□□□□ -0.33
SS18-225ENST00000585121 MARK1Q9P0L2 795 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 EBF1Q9UH73 591 aa12.97□□□□□ -0.33
SS18-225ENST00000585121 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.97□□□□□ -0.33
SS18-225ENST00000585121 SPTBN4Q9H254 2564 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 RNF225M0QZC1 329 aaPredicted RBP12.96□□□□□ -0.33
SS18-225ENST00000585121 ZBTB24O43167 697 aaPredicted RBP12.96□□□□□ -0.33
SS18-225ENST00000585121 LRP3O75074 770 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 FBXO21O94952 628 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 CYBBP04839 570 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 SDHBP21912 280 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 CORO1AP31146 461 aaKnown RBP12.96□□□□□ -0.33
SS18-225ENST00000585121 HARS2P49590 506 aaKnown RBP12.96□□□□□ -0.33
SS18-225ENST00000585121 RGS7P49802 495 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 PKDCCQ504Y2 493 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 USP39Q53GS9 565 aaKnown RBP12.96□□□□□ -0.33
SS18-225ENST00000585121 C10orf76Q5T2E6 689 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 BSPRYQ5W0U4 402 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 SDE2Q6IQ49 451 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 CLEC17AQ6ZS10 378 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 C11orf74Q86VG3 221 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 ALLCQ8N6M5 410 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 TERB1Q8NA31 727 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 TXNDC5Q8NBS9 432 aaKnown RBP12.96□□□□□ -0.33
SS18-225ENST00000585121 SLC35F5Q8WV83 523 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 IRGQQ8WZA9 623 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 KREMEN1Q96MU8 473 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 CRACR2AQ9BSW2 395 aa12.96□□□□□ -0.33
SS18-225ENST00000585121 HBS1LQ9Y450 684 aaKnown RBP12.96□□□□□ -0.33
SS18-225ENST00000585121 ATG2BQ96BY7 2078 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 GTPBP10A4D1E9 387 aaKnown RBP12.95□□□□□ -0.34
SS18-225ENST00000585121 PRR5-ARHGAP8B1AHC4 643 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 CACNG3O60359 315 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 FOXD2O60548 495 aaPredicted RBP12.95□□□□□ -0.34
SS18-225ENST00000585121 ERCC5P28715 1186 aaPredicted RBP12.95□□□□□ -0.34
SS18-225ENST00000585121 HOXC13P31276 330 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 DGKGP49619 791 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 ZNF132P52740 706 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 DAOAP59103 153 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 ARHGAP8P85298 464 aa12.95□□□□□ -0.34
SS18-225ENST00000585121 LMNB2Q03252 620 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms