RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 ALKBH5Q6P6C2 394 aaKnown RBP16.76■□□□□ 0.27
CSNK1D-223ENST00000584472 RAD9BQ6WBX8 426 aa16.76■□□□□ 0.27
CSNK1D-223ENST00000584472 TMEM110Q86TL2 294 aa16.76■□□□□ 0.27
CSNK1D-223ENST00000584472 ALYREFQ86V81 257 aaKnown RBP16.76■□□□□ 0.27
CSNK1D-223ENST00000584472 ERICH1Q86X53 443 aa16.76■□□□□ 0.27
CSNK1D-223ENST00000584472 PHF13Q86YI8 300 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-223ENST00000584472 DNASE1L2Q92874 299 aa16.76■□□□□ 0.27
CSNK1D-223ENST00000584472 USP13Q92995 863 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-223ENST00000584472 ISCUQ9H1K1 167 aa16.76■□□□□ 0.27
CSNK1D-223ENST00000584472 LRRC4Q9HBW1 653 aa16.76■□□□□ 0.27
CSNK1D-223ENST00000584472 TRPV5Q9NQA5 729 aa16.76■□□□□ 0.27
CSNK1D-223ENST00000584472 ST7Q9NRC1 585 aa16.76■□□□□ 0.27
CSNK1D-223ENST00000584472 TJP2Q9UDY2 1190 aa16.76■□□□□ 0.27
CSNK1D-223ENST00000584472 EPN1Q9Y6I3 576 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-223ENST00000584472 USP3Q9Y6I4 520 aa16.76■□□□□ 0.27
CSNK1D-223ENST00000584472 TMCO5BA8MYB1 307 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 E5RJQ4 531 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 PIK3R2O00459 728 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 LCA5LO95447 670 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 OLFM2O95897 454 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 OAS1P00973 400 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 HDCP19113 662 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 CYLC1P35663 651 aaPredicted RBP16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 NBL1P41271 181 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 TKTL1P51854 596 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 PRKCQQ04759 706 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 ADIGQ0VDE8 80 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 PTP4A2Q12974 167 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 GRM2Q14416 872 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 CCDC122Q5T0U0 273 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 YAF2Q8IY57 180 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 FLCNQ8NFG4 579 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 IPO4Q8TEX9 1081 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 IRF7Q92985 503 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 SLC22A12Q96S37 553 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 DDX23Q9BUQ8 820 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 OSBPL6Q9BZF3 934 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 BRD9Q9H8M2 597 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 TLR8Q9NR97 1041 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 GMIPQ9P107 970 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 ARHGAP26Q9UNA1 814 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 VPS13AQ96RL7 3174 aa16.75■□□□□ 0.27
CSNK1D-223ENST00000584472 EIF3CLB5ME19 914 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 ZNF263O14978 683 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 CHADO15335 359 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 NDUFA10O95299 355 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 FTLP02792 175 aaPredicted RBP16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 ERBB2P04626 1255 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 LCP1P13796 627 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 TCF3P15923 654 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 GDI1P31150 447 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 GABRB2P47870 512 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 PSEN1P49768 467 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 SNX16P57768 344 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 SLC7A9P82251 487 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 ARHGAP29Q52LW3 1261 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 MMS22LQ6ZRQ5 1243 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 MON1BQ7L1V2 547 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 DNAAF5Q86Y56 855 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 SIX6OS1Q8N1H7 587 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 ARL14EPQ8N8R7 260 aaPredicted RBP16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 MSANTD4Q8NCY6 345 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 BPIFB1Q8TDL5 484 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 C18orf8Q96DM3 657 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 LRRC3BQ96PB8 259 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 CYP2S1Q96SQ9 504 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 EIF3CQ99613 913 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 C11orf70Q9BRQ4 267 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 SMG9Q9H0W8 520 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 SYNCQ9H7C4 482 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 CNGB3Q9NQW8 809 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 THG1LQ9NWX6 298 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 ADAM22Q9P0K1 906 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 CHORDC1Q9UHD1 332 aaPredicted RBP16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 CCL26Q9Y258 94 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 MYO15AQ9UKN7 3530 aa16.74■□□□□ 0.27
CSNK1D-223ENST00000584472 COL4A2P08572 1712 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 ARNTLO00327 626 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 ARHGAP6O43182 974 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 PAPSS1O43252 624 aaPredicted RBP16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 NRDCO43847 1150 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 ABL1P00519 1130 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 C1QBPQ07021 282 aaKnown RBP16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 USP4Q13107 963 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 C2CD6Q53TS8 623 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 HECTD3Q5T447 861 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 PM20D1Q6GTS8 502 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 SCUBE3Q8IX30 993 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 MCOLN2Q8IZK6 566 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 SCML4Q8N228 414 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 KIAA1958Q8N8K9 716 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 ATOH1Q92858 354 aaPredicted RBP16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 VCPIP1Q96JH7 1222 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 ULBP1Q9BZM6 244 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 MIS12Q9H081 205 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 KCNF1Q9H3M0 494 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 TBC1D17Q9HA65 648 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 F5P12259 2224 aa16.73■□□□□ 0.27
CSNK1D-223ENST00000584472 FBXO21O94952 628 aa16.72■□□□□ 0.27
CSNK1D-223ENST00000584472 ZBED1O96006 694 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms