RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 CINPQ9BW66 212 aaPredicted RBP13.42□□□□□ -0.26
RNF43-208ENST00000584437 RGS18Q9NS28 235 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 RPL26L1Q9UNX3 145 aaKnown RBP13.42□□□□□ -0.26
RNF43-208ENST00000584437 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.42□□□□□ -0.26
RNF43-208ENST00000584437 OVOS2A0A0J9YW53 1432 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 OVOS2Q6IE36 1432 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 NCAM2O15394 837 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 FAM20BO75063 409 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 MTMR2Q13614 643 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 BMPR2Q13873 1038 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 TMEM26Q6ZUK4 368 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 SRPK1Q96SB4 655 aaKnown RBP13.42□□□□□ -0.26
RNF43-208ENST00000584437 KATNAL1Q9BW62 490 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 ZCWPW1Q9H0M4 648 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 LRRC4BQ9NT99 713 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 INTS13Q9NVM9 706 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 PCDHA3Q9Y5H8 950 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 ZSCAN5CA6NGD5 496 aaPredicted RBP13.42□□□□□ -0.26
RNF43-208ENST00000584437 PDE9AO76083 593 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 TKTP29401 623 aaKnown RBP13.42□□□□□ -0.26
RNF43-208ENST00000584437 TRIQKQ629K1 86 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 FBXO33Q7Z6M2 555 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 SLFN11Q7Z7L1 901 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 TBC1D16Q8TBP0 767 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 FAM172AQ8WUF8 416 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 GPAMQ9HCL2 828 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 CYP4F12Q9HCS2 524 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 CYLDQ9NQC7 956 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 UBQLN1Q9UMX0 589 aaKnown RBP13.42□□□□□ -0.26
RNF43-208ENST00000584437 C2CD2Q9Y426 696 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 ACTL7BQ9Y614 415 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 CLTCL1P53675 1640 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 C15orf38-AP3S2A0A0A6YYH1 394 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 A0A0G2JLW4 131 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 CAMTA2O94983 1202 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 ZNF682O95780 498 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 RXRGP48443 463 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 SPANXN2Q5MJ10 180 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 TCHHL1Q5QJ38 904 aaPredicted RBP13.41□□□□□ -0.26
RNF43-208ENST00000584437 ARMC3Q5W041 872 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 ARPINQ7Z6K5 226 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 MREGQ8N565 214 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 CKAP2Q8WWK9 683 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 VCPIP1Q96JH7 1222 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 DMAP1Q9NPF5 467 aaPredicted RBP13.41□□□□□ -0.26
RNF43-208ENST00000584437 MCM8Q9UJA3 840 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 HECW2Q9P2P5 1572 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 SNX3O60493 162 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 AKAP3O75969 853 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 DDHD2O94830 711 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 CBX6O95503 412 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 MZF1P28698 734 aaPredicted RBP13.41□□□□□ -0.26
RNF43-208ENST00000584437 ROR2Q01974 943 aaKnown RBP13.41□□□□□ -0.26
RNF43-208ENST00000584437 CRAMP1Q96RY5 1269 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 CLEC4MQ9H2X3 399 aaPredicted RBP13.41□□□□□ -0.26
RNF43-208ENST00000584437 STK39Q9UEW8 545 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 TSC22D2O75157 780 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 TPP2P29144 1249 aaPredicted RBP13.41□□□□□ -0.26
RNF43-208ENST00000584437 ETFBP38117 255 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 ELK3P41970 407 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 SKIV2L2P42285 1042 aaKnown RBP13.41□□□□□ -0.26
RNF43-208ENST00000584437 GSTA3Q16772 222 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 PDZK1Q5T2W1 519 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 RNF43Q68DV7 783 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 BNIPLQ7Z465 357 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 KRT73Q86Y46 540 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 MYO1HQ8N1T3 1032 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 BLOC1S5Q8TDH9 187 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 SLC20A1Q8WUM9 679 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 WDR60Q8WVS4 1066 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 ZSCAN32Q9NX65 697 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 ANKRD6Q9Y2G4 727 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 COMMD3-BMI1R4GMX3 469 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 TULP4Q9NRJ4 1543 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 SMIM31A0A1B0GVY4 71 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 TADA2AO75478 443 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 CHN2P52757 468 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 SLC16A1P53985 500 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 ITGA1P56199 1179 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 MAD2L1Q13257 205 aaPredicted RBP13.41□□□□□ -0.26
RNF43-208ENST00000584437 NDUFA5Q16718 116 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 KYAT3Q6YP21 454 aaKnown RBP13.41□□□□□ -0.26
RNF43-208ENST00000584437 ZNF398Q8TD17 642 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 UGT2B28Q9BY64 529 aa13.41□□□□□ -0.26
RNF43-208ENST00000584437 UNC5CO95185 931 aa13.4□□□□□ -0.26
RNF43-208ENST00000584437 CAPZA2P47755 286 aa13.4□□□□□ -0.26
RNF43-208ENST00000584437 HARS2P49590 506 aaKnown RBP13.4□□□□□ -0.26
RNF43-208ENST00000584437 NME5P56597 212 aa13.4□□□□□ -0.26
RNF43-208ENST00000584437 EFCAB12Q6NXP0 572 aa13.4□□□□□ -0.26
RNF43-208ENST00000584437 RIPOR1Q6ZS17 1223 aa13.4□□□□□ -0.26
RNF43-208ENST00000584437 NET1Q7Z628 596 aaPredicted RBP13.4□□□□□ -0.26
RNF43-208ENST00000584437 NT5DC3Q86UY8 548 aa13.4□□□□□ -0.26
RNF43-208ENST00000584437 CLEC10AQ8IUN9 316 aa13.4□□□□□ -0.26
RNF43-208ENST00000584437 FBXL16Q8N461 479 aa13.4□□□□□ -0.26
RNF43-208ENST00000584437 TSEN2Q8NCE0 465 aaKnown RBP13.4□□□□□ -0.26
RNF43-208ENST00000584437 AGAP11Q8TF27 550 aa13.4□□□□□ -0.26
RNF43-208ENST00000584437 SLC5A5Q92911 643 aa13.4□□□□□ -0.26
RNF43-208ENST00000584437 SPRTNQ9H040 489 aaPredicted RBP13.4□□□□□ -0.26
RNF43-208ENST00000584437 ERAP1Q9NZ08 941 aa13.4□□□□□ -0.26
RNF43-208ENST00000584437 AP4E1Q9UPM8 1137 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms