RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 MCM3APO60318 1980 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 K7ERI5 159 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MAPK13O15264 365 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 GSTA1P08263 222 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CD9P21926 228 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CCT8P50990 548 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 OGDHQ02218 1023 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PPIDQ08752 370 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PTK6Q13882 451 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ZNF568Q3ZCX4 644 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ANKRD20A2Q5SQ80 823 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ANKRD20A1Q5TYW2 823 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ANKRD20A3Q5VUR7 823 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 RBBP8NLQ8NC74 664 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PRR11Q96HE9 360 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 NLRP4Q96MN2 994 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MSTO1Q9BUK6 570 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 NGRNQ9NPE2 291 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 METTL5Q9NRN9 209 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MAFBQ9Y5Q3 323 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 SOCS7O14512 581 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 EXTL3O43909 919 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CDH16O75309 829 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MAP3K6O95382 1288 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 WEE2P0C1S8 567 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 GCAP28676 217 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 NOMO3P69849 1222 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 STRN3Q13033 797 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PDIA2Q13087 525 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MAMLD1Q13495 774 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CUL2Q13617 745 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 FAM160B1Q5W0V3 765 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 SPRYD7Q5W111 196 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 RHPN2Q8IUC4 686 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PRPF31Q8WWY3 499 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 RBM41Q96IZ5 413 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 FERD3LQ96RJ6 166 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 TMEM109Q9BVC6 243 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PLVAPQ9BX97 442 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CCDC134Q9H6E4 229 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 EBF2Q9HAK2 575 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 UBN1Q9NPG3 1134 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 SAGE1Q9NXZ1 904 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MKI67P46013 3256 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PTPRFP10586 1907 aa12.04□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CFAP73A6NFT4 308 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 FAM47DPA6NHR8 397 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 SGK1O00141 431 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PIK3R2O00459 728 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 SCGB1D2O95969 90 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ZNF286BP0CG31 522 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 EDNRBP24530 442 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ICAM3P32942 547 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 LACTBP83111 547 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ATP11AP98196 1134 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 GCNT1Q02742 428 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ZNF252P-AS1Q0IIN9 211 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 TTLL4Q14679 1199 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MAJINQ3KP22 176 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 NEK5Q6P3R8 708 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 LONP2Q86WA8 852 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 YIPF3Q9GZM5 350 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ZWILCHQ9H900 591 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ARHGEF3Q9NR81 526 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PCDHGB3Q9Y5G1 929 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PARP14Q460N5 1801 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 A0A0G2JND7 137 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 LRRD1A4D1F6 860 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ACSL4O60488 711 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 KRT1P04264 644 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CYP1A1P04798 512 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 KRT4P19013 534 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ADRA1DP25100 572 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 RAP1GAPP47736 663 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 NR2C2P49116 596 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 IL9RQ01113 521 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MTFR1Q15390 333 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ANKRD39Q53RE8 183 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CELF3Q5SZQ8 465 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 RFWD3Q6PCD5 774 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 LVRNQ6Q4G3 990 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 C12orf50Q8NA57 414 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 WDR90Q96KV7 1748 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MCEEQ96PE7 176 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 GPR20Q99678 358 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PRKAG3Q9UGI9 489 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PCDHB2Q9Y5E7 798 aa12.03□□□□□ -0.48
CDK5RAP3-231ENST00000584063 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PMM2O15305 246 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 PROSCO94903 275 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 ATP2A2P16615 1042 aaKnown RBP12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 VAMP1P23763 118 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 GTF2H1P32780 548 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 HSD17B2P37059 387 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CPA2P48052 419 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 RAD23BP54727 409 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 CAPSQ13938 189 aa12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 TAF1BQ53T94 588 aaPredicted RBP12.02□□□□□ -0.48
CDK5RAP3-231ENST00000584063 MDH1BQ5I0G3 518 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms