RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 MRPS21P82921 87 aaKnown RBP8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 TAF10Q12962 218 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 RESTQ13127 1097 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 ALCAMQ13740 583 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 MAPRE1Q15691 268 aaKnown RBP8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 TRIM61Q5EBN2 209 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 C6orf118Q5T5N4 469 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 EMC10Q5UCC4 262 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 EGFLAMQ63HQ2 1017 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 CCDC73Q6ZRK6 1079 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 HS2ST1Q7LGA3 356 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 TMEFF1Q8IYR6 380 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 ADGRG2Q8IZP9 1017 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 PDILTQ8N807 584 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 IL17RCQ8NAC3 791 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 OR6B3Q8NGW1 331 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 WHAMMQ8TF30 809 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 HMGB4Q8WW32 186 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 FNBP1Q96RU3 617 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 PNKPQ96T60 521 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 FAM129BQ96TA1 746 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 SCNM1Q9BWG6 230 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 TTLL2Q9BWV7 592 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 DPEP3Q9H4B8 488 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 ZFAND3Q9H8U3 227 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 FSCN3Q9NQT6 498 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 TMEM74BQ9NUR3 256 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 ZNF358Q9NW07 568 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 HSPBP1Q9NZL4 362 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 BCCIPQ9P287 314 aaKnown RBP eCLIP8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 CFAP97Q9P2B7 532 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 MBD1Q9UIS9 605 aaPredicted RBP8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 ASPMQ8IZT6 3477 aa8.29□□□□□ -1.08
SMCHD1-210ENST00000583800 TCRBV21S2A2A0A5A6 115 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 ZNF233A6NK53 670 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 CLDN5O00501 218 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 ADAM23O75077 832 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 ALDH1A2O94788 518 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 ZIC2O95409 532 aaPredicted RBP8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 CST3P01034 146 aaPredicted RBP8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 APODP05090 189 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 DLATP10515 647 aaKnown RBP8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 ADH5P11766 374 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 CEACAM1P13688 526 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 ENGP17813 658 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 KIR2DL1P43626 348 aaPredicted RBP8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 NOP14P78316 857 aaKnown RBP8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 SURF1Q15526 300 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 DUOXA2Q1HG44 320 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 RHBDF2Q6PJF5 856 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 LPCAT2Q7L5N7 544 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 TRAPPC11Q7Z392 1133 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 WDR49Q8IV35 697 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 CCDC65Q8IXS2 484 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 MYCBPAPQ8TBZ2 947 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 ALKBH8Q96BT7 664 aaKnown RBP8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 SPACA7Q96KW9 195 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 C8orf48Q96LL4 319 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 CEP295NLQ96MC4 621 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 ZNF518BQ9C0D4 1074 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 SNX25Q9H3E2 840 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 POLMQ9NP87 494 aaPredicted RBP8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 ARHGEF4Q9NR80 690 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 EHD2Q9NZN4 543 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 EVLQ9UI08 416 aaPredicted RBP8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 PCDHB11Q9Y5F2 797 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 AKAP13Q12802 2813 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 WDFY3Q8IZQ1 3526 aa8.28□□□□□ -1.08
SMCHD1-210ENST00000583800 SLC9A3R1O14745 358 aaPredicted RBP8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 TNFRSF10BO14763 440 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 KIAA0391O15091 583 aaKnown RBP8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 HYAL3O43820 417 aaPredicted RBP8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 TACC1O75410 805 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 PTPN1P18031 435 aaKnown RBP8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 TNNI1P19237 187 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 ITPKAP23677 461 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 HOXD13P35453 343 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 GNL1P36915 607 aaPredicted RBP8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 EIF2DP41214 584 aaKnown RBP8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 EIF1AXP47813 144 aaKnown RBP8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 PPP3CCP48454 512 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 TNNC1P63316 161 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 LMAN2Q12907 356 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 SNRNP35Q16560 246 aaKnown RBP8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 EOGTQ5NDL2 527 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 LY6G5CQ5SRR4 150 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 TDRD10Q5VZ19 366 aaKnown RBP8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 LYSMD4Q5XG99 296 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 SDE2Q6IQ49 451 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 ALKBH2Q6NS38 261 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 DDX42Q86XP3 938 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 SYT12Q8IV01 421 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 PGBD3Q8N328 593 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 DEFB119Q8N690 84 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 NAT16Q8N8M0 369 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 KDF1Q8NAX2 398 aaPredicted RBP8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 GATA6Q92908 595 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 FBXO32Q969P5 355 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 CCDC127Q96BQ5 260 aa8.27□□□□□ -1.09
SMCHD1-210ENST00000583800 ITPKCQ96DU7 683 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms