RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 CLCA4Q14CN2 919 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 CYB5RLQ6IPT4 315 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 ANO7Q6IWH7 933 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 RNF44Q7L0R7 432 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 IRF2BP2Q7Z5L9 587 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 ANKRD13AQ8IZ07 590 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 FSTL5Q8N475 847 aaPredicted RBP4.82□□□□□ -1.64
COPS3-217ENST00000583160 FAM227BQ96M60 508 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 SELENOOQ9BVL4 669 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 APOL5Q9BWW9 433 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 BRIP1Q9BX63 1249 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 NUP62CLQ9H1M0 184 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 AS3MTQ9HBK9 375 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 TMEM184CQ9NVA4 438 aa4.82□□□□□ -1.64
COPS3-217ENST00000583160 COL15A1P39059 1388 aa4.81□□□□□ -1.64
COPS3-217ENST00000583160 NTN1O95631 604 aa4.81□□□□□ -1.64
COPS3-217ENST00000583160 ANXA2P07355 339 aaKnown RBP4.81□□□□□ -1.64
COPS3-217ENST00000583160 TMEM191BP0C7N4 346 aa4.81□□□□□ -1.64
COPS3-217ENST00000583160 PRF1P14222 555 aa4.81□□□□□ -1.64
COPS3-217ENST00000583160 ATF3P18847 181 aa4.81□□□□□ -1.64
COPS3-217ENST00000583160 ID2Q02363 134 aa4.81□□□□□ -1.64
COPS3-217ENST00000583160 FHL3Q13643 280 aa4.81□□□□□ -1.64
COPS3-217ENST00000583160 PFKFB3Q16875 520 aaPredicted RBP4.81□□□□□ -1.64
COPS3-217ENST00000583160 GRHL2Q6ISB3 625 aa4.81□□□□□ -1.64
COPS3-217ENST00000583160 BHLHA9Q7RTU4 235 aa4.81□□□□□ -1.64
COPS3-217ENST00000583160 WDR75Q8IWA0 830 aaKnown RBP4.81□□□□□ -1.64
COPS3-217ENST00000583160 PHKBQ93100 1093 aa4.81□□□□□ -1.64
COPS3-217ENST00000583160 HIC2Q96JB3 615 aa4.81□□□□□ -1.64
COPS3-217ENST00000583160 CINPQ9BW66 212 aaPredicted RBP4.81□□□□□ -1.64
COPS3-217ENST00000583160 UNKQ9C0B0 810 aaKnown RBP4.81□□□□□ -1.64
COPS3-217ENST00000583160 KCNAB3O43448 404 aa4.8□□□□□ -1.64
COPS3-217ENST00000583160 TLR2O60603 784 aa4.8□□□□□ -1.64
COPS3-217ENST00000583160 PRAMEF2O60811 474 aa4.8□□□□□ -1.64
COPS3-217ENST00000583160 WDR47O94967 919 aa4.8□□□□□ -1.64
COPS3-217ENST00000583160 CYP19A1P11511 503 aaPredicted RBP4.8□□□□□ -1.64
COPS3-217ENST00000583160 TACR3P29371 465 aa4.8□□□□□ -1.64
COPS3-217ENST00000583160 HTR7P34969 479 aa4.8□□□□□ -1.64
COPS3-217ENST00000583160 YPEL5P62699 121 aa4.8□□□□□ -1.64
COPS3-217ENST00000583160 CFHR1Q03591 330 aa4.8□□□□□ -1.64
COPS3-217ENST00000583160 CCDC15Q0P6D6 951 aa4.8□□□□□ -1.64
COPS3-217ENST00000583160 TRIM71Q2Q1W2 868 aaKnown RBP4.8□□□□□ -1.64
COPS3-217ENST00000583160 RRAGBQ5VZM2 374 aa4.8□□□□□ -1.64
COPS3-217ENST00000583160 P3H2Q8IVL5 708 aa4.8□□□□□ -1.64
COPS3-217ENST00000583160 TIFAQ96CG3 184 aa4.8□□□□□ -1.64
COPS3-217ENST00000583160 PRR11Q96HE9 360 aaPredicted RBP4.8□□□□□ -1.64
COPS3-217ENST00000583160 SLC25A32Q9H2D1 315 aa4.8□□□□□ -1.64
COPS3-217ENST00000583160 VPS45Q9NRW7 570 aa4.8□□□□□ -1.64
COPS3-217ENST00000583160 ZMYM2Q9UBW7 1377 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 THAP12O43422 761 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 IL18RAPO95256 599 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 CTSAP10619 480 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 ATICP31939 592 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 GALNSP34059 522 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 POLGP54098 1239 aaPredicted RBP4.79□□□□□ -1.64
COPS3-217ENST00000583160 RPS13P62277 151 aaKnown RBP4.79□□□□□ -1.64
COPS3-217ENST00000583160 MTAPQ13126 283 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 STIM1Q13586 685 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 DNASE1L3Q13609 305 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 FHL1Q13642 323 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 DAG1Q14118 895 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 FAM110CQ1W6H9 321 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 DEF8Q6ZN54 512 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 KRT78Q8N1N4 520 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 MBD3L2Q8NHZ7 208 aaPredicted RBP4.79□□□□□ -1.64
COPS3-217ENST00000583160 SUN3Q8TAQ9 357 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 ADGRE3Q9BY15 652 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 NUAK2Q9H093 628 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 FOXP1Q9H334 677 aaPredicted RBP4.79□□□□□ -1.64
COPS3-217ENST00000583160 SAP30LQ9HAJ7 183 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 PNPLA8Q9NP80 782 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 HEYLQ9NQ87 328 aaPredicted RBP4.79□□□□□ -1.64
COPS3-217ENST00000583160 CORO2BQ9UQ03 480 aa4.79□□□□□ -1.64
COPS3-217ENST00000583160 LY6G6EA0A0G2JKS1 128 aa4.78□□□□□ -1.64
COPS3-217ENST00000583160 MYMKA6NI61 221 aa4.78□□□□□ -1.64
COPS3-217ENST00000583160 RHPN2P1A8MT19 583 aa4.78□□□□□ -1.64
COPS3-217ENST00000583160 FOXN3O00409 490 aaPredicted RBP4.78□□□□□ -1.64
COPS3-217ENST00000583160 IKBKBO14920 756 aa4.78□□□□□ -1.64
COPS3-217ENST00000583160 MBPP02686 304 aaPredicted RBP4.78□□□□□ -1.64
COPS3-217ENST00000583160 TMIGD3P0DMS9 266 aaPredicted RBP4.78□□□□□ -1.64
COPS3-217ENST00000583160 THBS4P35443 961 aa4.78□□□□□ -1.64
COPS3-217ENST00000583160 JAK3P52333 1124 aa4.78□□□□□ -1.64
COPS3-217ENST00000583160 FOXG1P55316 489 aaPredicted RBP4.78□□□□□ -1.64
COPS3-217ENST00000583160 HSF1Q00613 529 aa4.78□□□□□ -1.64
COPS3-217ENST00000583160 KPNB1Q14974 876 aaKnown RBP4.78□□□□□ -1.64
COPS3-217ENST00000583160 ACOX1Q15067 660 aa4.78□□□□□ -1.64
COPS3-217ENST00000583160 TWIST1Q15672 202 aa4.78□□□□□ -1.64
COPS3-217ENST00000583160 SLC9C1Q4G0N8 1177 aa4.78□□□□□ -1.64
COPS3-217ENST00000583160 KRT28Q7Z3Y7 464 aa4.78□□□□□ -1.64
COPS3-217ENST00000583160 PIP4P1Q86T03 277 aa4.78□□□□□ -1.64
COPS3-217ENST00000583160 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.78□□□□□ -1.64
COPS3-217ENST00000583160 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.78□□□□□ -1.64
COPS3-217ENST00000583160 IQCDQ96DY2 449 aa4.78□□□□□ -1.64
COPS3-217ENST00000583160 WACQ9BTA9 647 aa4.78□□□□□ -1.64
COPS3-217ENST00000583160 ARL8BQ9NVJ2 186 aa4.78□□□□□ -1.64
COPS3-217ENST00000583160 SEMA5BQ9P283 1151 aa4.78□□□□□ -1.64
COPS3-217ENST00000583160 SPATA31A1Q5TZJ5 1347 aa4.77□□□□□ -1.65
COPS3-217ENST00000583160 A0A087WZ62 844 aa4.77□□□□□ -1.65
COPS3-217ENST00000583160 TRIM38O00635 465 aa4.77□□□□□ -1.65
COPS3-217ENST00000583160 PQBP1O60828 265 aaKnown RBP4.77□□□□□ -1.65
COPS3-217ENST00000583160 PBX1P40424 430 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms