RNA–Protein interactions for RNA: ENST00000582923.1

PDLIM1P2-201, Transcript of PDZ and LIM domain 1 pseudogene 2, humanhuman

BASIC

Gene PDLIM1P2, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P2-201ENST00000582923 CEBPBP17676 345 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 KCNA5P22460 613 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 DDX6P26196 483 aaKnown RBP eCLIP9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 NOS2P35228 1153 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 LTBRP36941 435 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 CCR2P41597 374 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 PTPN9P43378 593 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 PGFP49763 221 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TUBP50607 506 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ATP11AP98196 1134 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 CDO1Q16878 200 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 PRSS36Q5K4E3 855 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ATAT1Q5SQI0 421 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 STXBP5Q5T5C0 1151 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SYPL2Q5VXT5 272 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TXNDC8Q6A555 127 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 GAREM2Q75VX8 874 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 BEND5Q7L4P6 421 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TMEM150AQ86TG1 271 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TAC4Q86UU9 113 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 MIB1Q86YT6 1006 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 CCAR2Q8N163 923 aaKnown RBP9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ADAM32Q8TC27 787 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 DQX1Q8TE96 717 aaKnown RBP9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TCEAL4Q96EI5 215 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 BTBD6Q96KE9 485 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 CFAP57Q96MR6 1250 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 CNPY3Q9BT09 278 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TRIM7Q9C029 511 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SMOC2Q9H3U7 446 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 DDIT4Q9NX09 232 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 OSER1Q9NX31 292 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 RRN3Q9NYV6 651 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 IP6K2Q9UHH9 426 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 NUDT5Q9UKK9 219 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 USTQ9Y2C2 406 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ZKSCAN5Q9Y2L8 839 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 DUSP10Q9Y6W6 482 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 MYO9BQ13459 2157 aa9.5□□□□□ -0.89
PDLIM1P2-201ENST00000582923 CHD7Q9P2D1 2997 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 USP27XA6NNY8 438 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 M0QYT0 321 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 MSI1O43347 362 aaKnown RBP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 COCHO43405 550 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 RNF8O76064 485 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 MOCS3O95396 460 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 PAPLNO95428 1278 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TRUB2O95900 331 aaKnown RBP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 OAS1P00973 400 aaKnown RBP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 FYNP06241 537 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 GBP1P32455 592 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ATP5C1P36542 298 aaKnown RBP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 AVPR1AP37288 418 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ARHGAP25P42331 645 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SSR1P43307 286 aaKnown RBP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ZNF143P52747 638 aaPredicted RBP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 OGDHQ02218 1023 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 NME3Q13232 169 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 MESDQ14696 234 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TCEAL1Q15170 157 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 C15orf59Q2T9L4 293 aaPredicted RBP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SLC25A52Q3SY17 297 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SNX30Q5VWJ9 437 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TRNP1Q6NT89 227 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 MSANTD2Q6P1R3 559 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SND1Q7KZF4 910 aaKnown RBP eCLIP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ARCQ7LC44 396 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 C17orf53Q8N3J3 647 aaPredicted RBP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ARL14EPQ8N8R7 260 aaPredicted RBP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 MAB21L3Q8N8X9 362 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SMRP1Q8NCR6 262 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TTC16Q8NEE8 873 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 MAFAQ8NHW3 353 aaPredicted RBP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ITFG1Q8TB96 612 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 FNIP1Q8TF40 1166 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 FAM172AQ8WUF8 416 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 KHSRPQ92945 711 aaKnown RBP eCLIP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 HLA-CQ95604 372 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 RNF34Q969K3 372 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 MSLNLQ96KJ4 702 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 CALR3Q96L12 384 aaKnown RBP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 NECTIN4Q96NY8 510 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SERPINB11Q96P15 392 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ALS2CR12Q96Q35 445 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TBCBQ99426 244 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 DDX23Q9BUQ8 820 aaKnown RBP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TASP1Q9H6P5 420 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 WDR6Q9NNW5 1121 aaKnown RBP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SMPD4Q9NXE4 827 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 MARCH2Q9P0N8 246 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 ZMYM5Q9UJ78 669 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 DNMT3LQ9UJW3 386 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 USP15Q9Y4E8 981 aaPredicted RBP9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 PAXBP1Q9Y5B6 917 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 TRANK1O15050 2925 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 DENND4AQ7Z401 1863 aa9.49□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SLC12A8A0AV02 714 aa9.48□□□□□ -0.89
PDLIM1P2-201ENST00000582923 SPOPO43791 374 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms