RNA–Protein interactions for RNA: ENST00000582565.1

NCOR1-222, Transcript of nuclear receptor corepressor 1, human

TSL 4

Gene NCOR1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-222	ENST00000582565	CYP3A5	P20815	502 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	MARCKS	P29966	332 aa	Predicted RBP	11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	DNAJA1	P31689	397 aa	Known RBP	11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	CXCL12	P48061	93 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	FNTB	P49356	437 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	CCR3	P51677	355 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	CDR1	P51861	262 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	NCKAP1L	P55160	1127 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	MLLT6	P55198	1093 aa	Predicted RBP	11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	ARHGAP8	P85298	464 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	ATP2C1	P98194	919 aa	Predicted RBP	11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	STRN3	Q13033	797 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	TMEM119	Q4V9L6	283 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	SLC39A4	Q6P5W5	647 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	ARID3B	Q8IVW6	561 aa	Predicted RBP	11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	SPEM1	Q8N4L4	309 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	CELF5	Q8N6W0	485 aa	Known RBP	11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	OR10T2	Q8NGX3	314 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	TTC8	Q8TAM2	541 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	KCNN1	Q92952	543 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	ZFYVE19	Q96K21	471 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	IER2	Q9BTL4	223 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	STRIP2	Q9ULQ0	834 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	DENND4C	Q5VZ89	1909 aa		11.25	□□□□□ -0.61
NCOR1-222	ENST00000582565	USP24	Q9UPU5	2620 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	MYBPHL	A2RUH7	354 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	OR6C75	A6NL08	312 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	ADAM23	O75077	832 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	PRAMEF12	O95522	483 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	ITGB7	P26010	798 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	LILRA4	P59901	499 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	LAIR1	Q6GTX8	287 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	DSTYK	Q6XUX3	929 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	NLRC3	Q7RTR2	1065 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	HAUS6	Q7Z4H7	955 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	SECISBP2L	Q93073	1101 aa	Known RBP	11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	PSMG2	Q969U7	264 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	SENP8	Q96LD8	212 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	FIZ1	Q96SL8	496 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	RTKN	Q9BST9	563 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	GPR88	Q9GZN0	384 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	SLITRK6	Q9H5Y7	841 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	GTSE1	Q9NYZ3	720 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	GMEB2	Q9UKD1	530 aa		11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	TPX2	Q9ULW0	747 aa	Known RBP	11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565	UBQLN1	Q9UMX0	589 aa	Known RBP	11.24	□□□□□ -0.61
NCOR1-222	ENST00000582565		A0A0B4J269	797 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	VWA3A	A6NCI4	1184 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	SPECC1L-ADORA2A	F8WAN1	911 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	PIR	O00625	290 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	PAPSS2	O95340	614 aa	Predicted RBP	11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	PIGR	P01833	764 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	RET	P07949	1114 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	TYMP	P19971	482 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	SDHB	P21912	280 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	EPHB3	P54753	998 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	TNK2	Q07912	1038 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	SIM2	Q14190	667 aa	Predicted RBP	11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	MYBPC2	Q14324	1141 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	SPATA1	Q5VX52	437 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	JADE1	Q6IE81	842 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	PKN3	Q6P5Z2	889 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	PRR23B	Q6ZRT6	265 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	E2F7	Q96AV8	911 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	CHFR	Q96EP1	664 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	REEP2	Q9BRK0	252 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	C8orf33	Q9H7E9	229 aa	Predicted RBP	11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	LRRC4C	Q9HCJ2	640 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	CPSF3	Q9UKF6	684 aa	Known RBP	11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	TBX20	Q9UMR3	447 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	EML5	Q05BV3	1969 aa		11.23	□□□□□ -0.61
NCOR1-222	ENST00000582565	ANO9	A1A5B4	782 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	TISP43	B9A030	160 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	SLC30A4	O14863	429 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	OGT	O15294	1046 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	OBSL1	O75147	1896 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	TGFB1	P01137	390 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	ATF6	P18850	670 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	GABRR2	P28476	465 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	MATR3	P43243	847 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	ALDH1A3	P47895	512 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	KPNA1	P52294	538 aa	Predicted RBP	11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	ZNF131	P52739	623 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	CYP4F8	P98187	520 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	PLD1	Q13393	1074 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	ZNF638	Q14966	1978 aa	Known RBP	11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	PON2	Q15165	354 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	GREB1	Q4ZG55	1949 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	GPR158	Q5T848	1215 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	CDCP2	Q5VXM1	449 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	C9orf57	Q5W0N0	161 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	HEATR6	Q6AI08	1181 aa	Known RBP	11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	USP37	Q86T82	979 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	TMEM150A	Q86TG1	271 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	LRRTM3	Q86VH5	581 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	LSR	Q86X29	649 aa	Predicted RBP	11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	YAF2	Q8IY57	180 aa		11.22	□□□□□ -0.61
NCOR1-222	ENST00000582565	RIN3	Q8TB24	985 aa		11.22	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms