RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 KCTD13Q8WZ19 329 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 ATXN3LQ9H3M9 355 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 TBC1D17Q9HA65 648 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 IL21Q9HBE4 155 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 ACP6Q9NPH0 428 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 GDE1Q9NZC3 331 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 WNT16Q9UBV4 365 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 ADAMTS1Q9UHI8 967 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 CDH7Q9ULB5 785 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 SCML2Q9UQR0 700 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 COL4A3Q01955 1670 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 A0A0A6YYK5 440 aaPredicted RBP14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 A0A1W2PRU2 124 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 FAM92AA1XBS5 289 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 MACROD2A1Z1Q3 448 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 SART1O43290 800 aaKnown RBP14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 FBXO21O94952 628 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 F11P03951 625 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 SP9P0CG40 484 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 CEBPBP17676 345 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 PFKLP17858 780 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 GBP2P32456 591 aaPredicted RBP14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 GPD2P43304 727 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 USP46P62068 366 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 TAF10Q12962 218 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 SLC5A9Q2M3M2 681 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 RAB41Q5JT25 222 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 ALKBH5Q6P6C2 394 aaKnown RBP14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 GAREM2Q75VX8 874 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 NOP9Q86U38 636 aaKnown RBP14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 NPAS3Q8IXF0 933 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 MAML2Q8IZL2 1156 aaPredicted RBP14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 SYCE1Q8N0S2 351 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 ARHGAP18Q8N392 663 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 STKLD1Q8NE28 680 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 SCAMP5Q8TAC9 235 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 ITFG1Q8TB96 612 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 CTNNBL1Q8WYA6 563 aaPredicted RBP14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 FGF13Q92913 245 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 WDR24Q96S15 920 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 MIS12Q9H081 205 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 SLITRK6Q9H5Y7 841 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 TLR8Q9NR97 1041 aaKnown RBP14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 SEPT11Q9NVA2 429 aaKnown RBP14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 IGSF9Q9P2J2 1179 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 CDC23Q9UJX2 597 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 NOCTQ9UK39 431 aaKnown RBP14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 JRKLQ9Y4A0 524 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 MRFAP1Q9Y605 127 aa14.14□□□□□ -0.15
CSNK1D-220ENST00000581737 ANAPC1Q9H1A4 1944 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 NUP210Q8TEM1 1887 aaPredicted RBP14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 CCR2P41597 374 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 PSEN1P49768 467 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 TKTL1P51854 596 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 ADIGQ0VDE8 80 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 PDCLQ13371 301 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 TEAD2Q15562 447 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 TAF3Q5VWG9 929 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 GPRIN1Q7Z2K8 1008 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 ZNF571Q7Z3V5 609 aaPredicted RBP14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 MTERF4Q7Z6M4 381 aaKnown RBP14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 PASD1Q8IV76 773 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 SCML4Q8N228 414 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 IPO4Q8TEX9 1081 aaKnown RBP14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 ING5Q8WYH8 240 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 DDX1Q92499 740 aaKnown RBP14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 TCEAL4Q96EI5 215 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 TRIM11Q96F44 468 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 CNTNAP3BQ96NU0 1288 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 AGPAT1Q99943 283 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 RPP25Q9BUL9 199 aaKnown RBP14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 CNTNAP3Q9BZ76 1288 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 FOXQ1Q9C009 403 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 TASP1Q9H6P5 420 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 CNGB3Q9NQW8 809 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 ST7Q9NRC1 585 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 DLL3Q9NYJ7 618 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 EPS15L1Q9UBC2 864 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 NAGPAQ9UK23 515 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 USP3Q9Y6I4 520 aa14.13□□□□□ -0.15
CSNK1D-220ENST00000581737 A0A087X0T9 212 aa14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 TRAV19A0A0A6YYK7 116 aa14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 EFCAB8A8MWE9 144 aa14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 TULP2O00295 520 aa14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 CTIFO43310 598 aaKnown RBP14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 MOSPD3O75425 235 aa14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 ZBED1O96006 694 aa14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 MMEP08473 750 aa14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 FAM228BP0C875 321 aa14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 TCP1P17987 556 aaKnown RBP14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 CDH5P33151 784 aaPredicted RBP14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 RGS7P49802 495 aa14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 TUBP50607 506 aa14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 GPR158Q5T848 1215 aa14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 CCDC70Q6NSX1 233 aa14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 PMF1Q6P1K2 205 aa14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 MTSS1LQ765P7 747 aa14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 TADA2BQ86TJ2 420 aa14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 MON1AQ86VX9 555 aa14.12□□□□□ -0.15
CSNK1D-220ENST00000581737 SUMF1Q8NBK3 374 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms