RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 SLC39A13Q96H72 371 aa5.17□□□□□ -1.58
NF1-220ENST00000581113 THAP7Q9BT49 309 aaPredicted RBP5.17□□□□□ -1.58
NF1-220ENST00000581113 STK33Q9BYT3 514 aa5.17□□□□□ -1.58
NF1-220ENST00000581113 SERGEFQ9UGK8 458 aa5.17□□□□□ -1.58
NF1-220ENST00000581113 LRCH1Q9Y2L9 728 aa5.17□□□□□ -1.58
NF1-220ENST00000581113 SOGA1O94964 1423 aa5.17□□□□□ -1.58
NF1-220ENST00000581113 FER1L4A9Z1Z3 1794 aa5.17□□□□□ -1.58
NF1-220ENST00000581113 EIF4G3O43432 1585 aaKnown RBP5.16□□□□□ -1.58
NF1-220ENST00000581113 RAD54L2Q9Y4B4 1467 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 COL15A1P39059 1388 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 TARBP1Q13395 1621 aaKnown RBP5.16□□□□□ -1.58
NF1-220ENST00000581113 CA12O43570 354 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 PROP1O75360 226 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 WDR47O94967 919 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 SRGAP2BP0DMP2 458 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 SLC5A2P31639 672 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 MCM5P33992 734 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 COPB1P53618 953 aaKnown RBP5.16□□□□□ -1.58
NF1-220ENST00000581113 DEUP1Q05D60 604 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 LMAN2Q12907 356 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 OS9Q13438 667 aaPredicted RBP5.16□□□□□ -1.58
NF1-220ENST00000581113 FHL3Q13643 280 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 RAB30Q15771 203 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 TMTC4Q5T4D3 741 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 FCRLBQ6BAA4 426 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 PRIMA1Q86XR5 153 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 SFTPA1Q8IWL2 248 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 SUN3Q8TAQ9 357 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 IPO4Q8TEX9 1081 aaKnown RBP5.16□□□□□ -1.58
NF1-220ENST00000581113 PLCB1Q9NQ66 1216 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 NECTIN3Q9NQS3 549 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 TM7SF3Q9NS93 570 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 TAGLN3Q9UI15 199 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 ASAP1Q9ULH1 1129 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 COX11Q9Y6N1 276 aa5.16□□□□□ -1.58
NF1-220ENST00000581113 TDRD9Q8NDG6 1382 aaKnown RBP5.15□□□□□ -1.58
NF1-220ENST00000581113 ABHD14A-ACY1A0A1B0GW23 586 aa5.15□□□□□ -1.58
NF1-220ENST00000581113 ADAMTS3O15072 1205 aa5.15□□□□□ -1.58
NF1-220ENST00000581113 C1RP00736 705 aa5.15□□□□□ -1.58
NF1-220ENST00000581113 VIPP01282 170 aa5.15□□□□□ -1.58
NF1-220ENST00000581113 RENBPP51606 427 aa5.15□□□□□ -1.58
NF1-220ENST00000581113 NSUN2Q08J23 767 aaKnown RBP eCLIP5.15□□□□□ -1.58
NF1-220ENST00000581113 GRHL2Q6ISB3 625 aa5.15□□□□□ -1.58
NF1-220ENST00000581113 GGT6Q6P531 493 aa5.15□□□□□ -1.58
NF1-220ENST00000581113 SERPINA13PQ6UXR4 307 aa5.15□□□□□ -1.58
NF1-220ENST00000581113 SPICE1Q8N0Z3 855 aa5.15□□□□□ -1.58
NF1-220ENST00000581113 TMEM41AQ96HV5 264 aa5.15□□□□□ -1.58
NF1-220ENST00000581113 SNX18Q96RF0 628 aa5.15□□□□□ -1.58
NF1-220ENST00000581113 WDR24Q96S15 920 aa5.15□□□□□ -1.58
NF1-220ENST00000581113 TTLL2Q9BWV7 592 aa5.15□□□□□ -1.58
NF1-220ENST00000581113 FGD5Q6ZNL6 1462 aa5.15□□□□□ -1.59
NF1-220ENST00000581113 CUX1P39880 1505 aa5.15□□□□□ -1.59
NF1-220ENST00000581113 A0A0U1RQG5 324 aaPredicted RBP5.14□□□□□ -1.59
NF1-220ENST00000581113 MANSC4A6NHS7 340 aaPredicted RBP5.14□□□□□ -1.59
NF1-220ENST00000581113 SUV39H1O43463 412 aa5.14□□□□□ -1.59
NF1-220ENST00000581113 PEX14O75381 377 aa5.14□□□□□ -1.59
NF1-220ENST00000581113 DRD1P21728 446 aa5.14□□□□□ -1.59
NF1-220ENST00000581113 ADRA1DP25100 572 aa5.14□□□□□ -1.59
NF1-220ENST00000581113 IL6STP40189 918 aaPredicted RBP5.14□□□□□ -1.59
NF1-220ENST00000581113 PBX1P40424 430 aa5.14□□□□□ -1.59
NF1-220ENST00000581113 BIRC2Q13490 618 aa5.14□□□□□ -1.59
NF1-220ENST00000581113 ATP1A4Q13733 1029 aa5.14□□□□□ -1.59
NF1-220ENST00000581113 ACOX1Q15067 660 aa5.14□□□□□ -1.59
NF1-220ENST00000581113 P3H1Q32P28 736 aa5.14□□□□□ -1.59
NF1-220ENST00000581113 ZNF788Q6ZQV5 615 aa5.14□□□□□ -1.59
NF1-220ENST00000581113 BCDIN3DQ7Z5W3 292 aaKnown RBP5.14□□□□□ -1.59
NF1-220ENST00000581113 RPS6KC1Q96S38 1066 aa5.14□□□□□ -1.59
NF1-220ENST00000581113 CRB3Q9BUF7 120 aa5.14□□□□□ -1.59
NF1-220ENST00000581113 WDR12Q9GZL7 423 aaKnown RBP5.14□□□□□ -1.59
NF1-220ENST00000581113 USP29Q9HBJ7 922 aa5.14□□□□□ -1.59
NF1-220ENST00000581113 PTGFRNQ9P2B2 879 aa5.14□□□□□ -1.59
NF1-220ENST00000581113 A0A087WV62 115 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 LOC102724159A0A0B4J2E5 919 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 F5H423 210 aaPredicted RBP5.13□□□□□ -1.59
NF1-220ENST00000581113 PIP5K1BO14986 540 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 FFAR2O15552 330 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 GCATO75600 419 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 NHLRC4P0CG21 123 aaPredicted RBP5.13□□□□□ -1.59
NF1-220ENST00000581113 ZNF37AP17032 561 aaPredicted RBP5.13□□□□□ -1.59
NF1-220ENST00000581113 PROK1P58294 105 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 TXNL4AP83876 142 aaKnown RBP5.13□□□□□ -1.59
NF1-220ENST00000581113 TNFAIP2Q03169 654 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 MTAPQ13126 283 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 BFSP2Q13515 415 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 PWP2Q15269 919 aaKnown RBP5.13□□□□□ -1.59
NF1-220ENST00000581113 TMEM196Q5HYL7 178 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 PRAMEF17Q5VTA0 474 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 ARL6IP4Q66PJ3 421 aaKnown RBP5.13□□□□□ -1.59
NF1-220ENST00000581113 RASGRP3Q8IV61 690 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 PNPLA1Q8N8W4 532 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 ZNF527Q8NB42 609 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 HS6ST2Q96MM7 605 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 KRTAP4-5Q9BYR2 181 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 EPS8L2Q9H6S3 715 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 AOX1Q06278 1338 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 RIMBP3CA6NJZ7 1639 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 RIMBP3BA6NNM3 1639 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 RIMBP3Q9UFD9 1639 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 OR2W5A6NFC9 320 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 H7C1Q1 480 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms