RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 USP9YO00507 2555 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-217ENST00000580654 A0A0B4J269 797 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 A0A1B0GTQ1 180 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 GFRA2O00451 464 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 ATP2C2O75185 946 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 LDOC1O95751 146 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 C1SP09871 688 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 OR52Z1P0C646 297 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 CISD3P0C7P0 127 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 MBL2P11226 248 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 PLS3P13797 630 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 GRIA4P48058 902 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 UCNP55089 124 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 WNT7BP56706 349 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 NFKB2Q00653 900 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 RAD51AP2Q09MP3 1159 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 SHBQ15464 509 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 KYAT1Q16773 422 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 ANO4Q32M45 955 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 SV2CQ496J9 727 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 PRAMEF14Q5SWL7 426 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 BTBD8Q5XKL5 378 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 HAUS3Q68CZ6 603 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 GRAMD4Q6IC98 578 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 FAM171BQ6P995 826 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 DENND5BQ6ZUT9 1274 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 SPATA2LQ8IUW3 424 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 DIS3L2Q8IYB7 885 aaKnown RBP8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 EXD3Q8N9H8 876 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 ENGASEQ8NFI3 743 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 KCNN1Q92952 543 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 OTUB2Q96DC9 234 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 P2RY11Q96G91 374 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 OSGEPQ9NPF4 335 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 DNAJC17Q9NVM6 304 aaKnown RBP8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 KCNK4Q9NYG8 393 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 C2CD2Q9Y426 696 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 STON1Q9Y6Q2 735 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 C2CD3Q4AC94 2353 aa8.18□□□□□ -1.1
SMARCE1-217ENST00000580654 GABRDO14764 452 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 COCHO43405 550 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 ACTN4O43707 911 aaKnown RBP8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 CACNG3O60359 315 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 GREM1O60565 184 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 CDKL5O76039 1030 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 ABL1P00519 1130 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 PIGRP01833 764 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 CDK4P11802 303 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 GLDCP23378 1020 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 BDNFP23560 247 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 GUCY2CP25092 1073 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 PSMA5P28066 241 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 OXTRP30559 389 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 CCR10P46092 362 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 ACOT2P49753 483 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 LIG4P49917 911 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 COPAP53621 1224 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 NCKAP1LP55160 1127 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 PCBP4P57723 403 aaKnown RBP8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 VAC14Q08AM6 782 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 TAF10Q12962 218 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 NFATC3Q12968 1075 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 ENPP2Q13822 863 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 ZNF174Q15697 407 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 BMP2KLQ5H9B9 411 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 BROXQ5VW32 411 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 DDX42Q86XP3 938 aaKnown RBP eCLIP8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 TMPRSS6Q8IU80 811 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 CACTIN-AS1Q8N1I8 211 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 C4orf32Q8N8J7 132 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 DCBLD1Q8N8Z6 715 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 CXorf38Q8TB03 319 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 RFFLQ8WZ73 363 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 SNX19Q92543 992 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 MYLPFQ96A32 169 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 BICD1Q96G01 975 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 FAM84AQ96KN4 292 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 DUSP9Q99956 384 aaKnown RBP8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 MSTO1Q9BUK6 570 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 NUP58Q9BVL2 599 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 ZMYND15Q9H091 742 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 ASB7Q9H672 318 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 CRTAC1Q9NQ79 661 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 TMEM30AQ9NV96 361 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 ORC3Q9UBD5 711 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 PCDHB6Q9Y5E3 794 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 PCDHB1Q9Y5F3 818 aa8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 COL27A1Q8IZC6 1860 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-217ENST00000580654 UTP20O75691 2785 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 NPHP3-ACAD11A0A0J9YXS1 232 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 PP2D1A8MPX8 630 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 TISP43B9A030 160 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 ANKRD63C9JTQ0 380 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 HNRNPDLO14979 420 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 TYRP14679 529 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 LMO2P25791 158 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 ACSL1P33121 698 aa8.16□□□□□ -1.1
SMARCE1-217ENST00000580654 PPP3CCP48454 512 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms