RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 TTC8Q8TAM2 541 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 CYP2S1Q96SQ9 504 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 CDK5RAP1Q96SZ6 601 aaKnown RBP10.38□□□□□ -0.75
GGA3-209ENST00000580646 FAM83CQ9BQN1 747 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 SYT11Q9BT88 431 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 SLC4A5Q9BY07 1137 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 MIS12Q9H081 205 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 CHRDQ9H2X0 955 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 TRPC7Q9HCX4 862 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 TLR8Q9NR97 1041 aaKnown RBP10.38□□□□□ -0.75
GGA3-209ENST00000580646 GTSE1Q9NYZ3 720 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 CLIC5Q9NZA1 410 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 PRDM4Q9UKN5 801 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 FBXO4Q9UKT5 387 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 R4GN57 208 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 TRAV19A0A0A6YYK7 116 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 SPECC1L-ADORA2AF8WAN1 911 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 ZBED1O96006 694 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 OAS1P00973 400 aaKnown RBP10.37□□□□□ -0.75
GGA3-209ENST00000580646 CALCAP01258 141 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 CYP1A1P04798 512 aaPredicted RBP10.37□□□□□ -0.75
GGA3-209ENST00000580646 CKMP06732 381 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 TPM1P09493 284 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 USP17L7P0C7H9 530 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 UNGP13051 313 aaPredicted RBP10.37□□□□□ -0.75
GGA3-209ENST00000580646 HDCP19113 662 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 CDC25BP30305 580 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 CTHP32929 405 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 GABRB2P47870 512 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 ZNF75DP51815 510 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 NOMO3P69849 1222 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 FMO1Q01740 532 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 CSTF1Q05048 431 aaKnown RBP10.37□□□□□ -0.75
GGA3-209ENST00000580646 ADIGQ0VDE8 80 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 MTAPQ13126 283 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 TBX2Q13207 712 aaPredicted RBP10.37□□□□□ -0.75
GGA3-209ENST00000580646 PDCLQ13371 301 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 ASIC2Q16515 512 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 ITPRIPL2Q3MIP1 535 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 ZNF528Q3MIS6 628 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 CC2D1AQ6P1N0 951 aaPredicted RBP10.37□□□□□ -0.75
GGA3-209ENST00000580646 ZC3H14Q6PJT7 736 aaKnown RBP10.37□□□□□ -0.75
GGA3-209ENST00000580646 TXNDC11Q6PKC3 985 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 MAMSTRQ6ZN01 415 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 BEND5Q7L4P6 421 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 TADA2BQ86TJ2 420 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 ZDHHC17Q8IUH5 632 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 SIX6OS1Q8N1H7 587 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 WDTC1Q8N5D0 677 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 ARL14EPQ8N8R7 260 aaPredicted RBP10.37□□□□□ -0.75
GGA3-209ENST00000580646 MSANTD4Q8NCY6 345 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 RIN3Q8TB24 985 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 SLC22A12Q96S37 553 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 AGPAT1Q99943 283 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 TRIM62Q9BVG3 475 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 SEMA4AQ9H3S1 761 aa10.37□□□□□ -0.75
GGA3-209ENST00000580646 PTPRZ1P23471 2315 aaPredicted RBP10.36□□□□□ -0.75
GGA3-209ENST00000580646 CACNA1IQ9P0X4 2223 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 C2orf78A6NCI8 922 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 GLI1P08151 1106 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 MMEP08473 750 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 CHRNB2P17787 502 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 CASP14P31944 242 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 SCNN1AP37088 669 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 TERF1P54274 439 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 GSCP56915 257 aaPredicted RBP10.36□□□□□ -0.75
GGA3-209ENST00000580646 DAOAP59103 153 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 SLC7A9P82251 487 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 CENPCQ03188 943 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 IFRD2Q12894 506 aaPredicted RBP10.36□□□□□ -0.75
GGA3-209ENST00000580646 RUNX3Q13761 415 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 LRRC32Q14392 662 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 PDGFRLQ15198 375 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 HECTD3Q5T447 861 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 TRIM68Q6AZZ1 485 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 BHLHA9Q7RTU4 235 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.36□□□□□ -0.75
GGA3-209ENST00000580646 CNGA4Q8IV77 575 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 C1orf131Q8NDD1 294 aaKnown RBP10.36□□□□□ -0.75
GGA3-209ENST00000580646 PPP1R13BQ96KQ4 1090 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 DNAJC7Q99615 494 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 IER2Q9BTL4 223 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 ULBP1Q9BZM6 244 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 EBF3Q9H4W6 596 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 HPS4Q9NQG7 708 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 ASNSD1Q9NWL6 643 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 GMIPQ9P107 970 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 CYTH4Q9UIA0 394 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 COL4A2P08572 1712 aa10.36□□□□□ -0.75
GGA3-209ENST00000580646 E5RJQ4 531 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 MFAP3LO75121 409 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 GABBR2O75899 941 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 KRT37O76014 449 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 LMNAP02545 664 aaKnown RBP10.35□□□□□ -0.75
GGA3-209ENST00000580646 SERPING1P05155 500 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 RALAP11233 206 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 GZMAP12544 262 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 LCP1P13796 627 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 ARSAP15289 507 aa10.35□□□□□ -0.75
GGA3-209ENST00000580646 RGS7P49802 495 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms