RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 ATP5C1P36542 298 aaKnown RBP14.1□□□□□ -0.15
TRAF4-214ENST00000580073 MAPK8P45983 427 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 PSEN1P49768 467 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 STARD3Q14849 445 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 ZCWPW2Q504Y3 356 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 COBLL1Q53SF7 1204 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 SYCP2LQ5T4T6 812 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 KLHDC10Q6PID8 442 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 ACOT1Q86TX2 421 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 CHPFQ8IZ52 775 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 FUKQ8N0W3 1084 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 SCAMP5Q8TAC9 235 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 TMC2Q8TDI7 906 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 MED15Q96RN5 788 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 BBS2Q9BXC9 721 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 GZF1Q9H116 711 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-214ENST00000580073 NUP62CLQ9H1M0 184 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 CSNK1G1Q9HCP0 422 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 CYLDQ9NQC7 956 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 MARK1Q9P0L2 795 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 TMEM63CQ9P1W3 806 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 CALCOCO1Q9P1Z2 691 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 PILRBQ9UKJ0 227 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 ZNF510Q9Y2H8 683 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 TP53BP1Q12888 1972 aaPredicted RBP14.1□□□□□ -0.15
TRAF4-214ENST00000580073 CACNA1EQ15878 2313 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 ATXN2Q99700 1313 aaKnown RBP14.1□□□□□ -0.15
TRAF4-214ENST00000580073 FAM208BQ5VWN6 2430 aa14.1□□□□□ -0.15
TRAF4-214ENST00000580073 GON4LQ3T8J9 2241 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 GOLGA6L22H0YM25 854 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 GFRA2O00451 464 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 GIPC1O14908 333 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 IKBKBO14920 756 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 CALUO43852 315 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-214ENST00000580073 NDUFS2O75306 463 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 SERPINF2P08697 491 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 HNRNPLP14866 589 aaKnown RBP eCLIP14.09□□□□□ -0.15
TRAF4-214ENST00000580073 GNSP15586 552 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 GABRG2P18507 467 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 PTGER3P43115 390 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 CASP4P49662 377 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 ZNF132P52740 706 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 ZACNQ401N2 412 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 RBM43Q6ZSC3 357 aaKnown RBP14.09□□□□□ -0.15
TRAF4-214ENST00000580073 HTR3DQ70Z44 454 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 NAT16Q8N8M0 369 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 KDF1Q8NAX2 398 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-214ENST00000580073 DEFB124Q8NES8 71 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 PLEKHO2Q8TD55 490 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 SLC2A14Q8TDB8 520 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 ZNF516Q92618 1163 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 CCDC34Q96HJ3 373 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 FAM124BQ9H5Z6 455 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-214ENST00000580073 RMND1Q9NWS8 449 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 CHORDC1Q9UHD1 332 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-214ENST00000580073 MBD1Q9UIS9 605 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-214ENST00000580073 HOOK1Q9UJC3 728 aaKnown RBP14.09□□□□□ -0.15
TRAF4-214ENST00000580073 SCML2Q9UQR0 700 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 TRAF3IP3Q9Y228 551 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 NEUROG3Q9Y4Z2 214 aa14.09□□□□□ -0.15
TRAF4-214ENST00000580073 TRIM49BA6NDI0 452 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 PDXKO00764 312 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 MAPK13O15264 365 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 C4BPAP04003 597 aaKnown RBP14.08□□□□□ -0.16
TRAF4-214ENST00000580073 NR3C1P04150 777 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 CHRM1P11229 460 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-214ENST00000580073 RALAP11233 206 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 CCDC130P13994 396 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 TYRP14679 529 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 DGKGP49619 791 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 NDST1P52848 882 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 CDH8P55286 799 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 MAP3K7CLP57077 242 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 ZNF33AQ06730 810 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 CRYBG2Q8N1P7 616 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 TTC39CQ8N584 583 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 IPO4Q8TEX9 1081 aaKnown RBP14.08□□□□□ -0.16
TRAF4-214ENST00000580073 UCMAQ8WVF2 138 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 FOXJ1Q92949 421 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 CYP3A43Q9HB55 503 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 DNMT3LQ9UJW3 386 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 ZMIZ1Q9ULJ6 1067 aa14.08□□□□□ -0.16
TRAF4-214ENST00000580073 C1QTNF9BB2RNN3 333 aa14.07□□□□□ -0.16
TRAF4-214ENST00000580073 ASS1P00966 412 aaKnown RBP14.07□□□□□ -0.16
TRAF4-214ENST00000580073 C1QTNF9P0C862 333 aa14.07□□□□□ -0.16
TRAF4-214ENST00000580073 KRT13P13646 458 aa14.07□□□□□ -0.16
TRAF4-214ENST00000580073 ITPKAP23677 461 aa14.07□□□□□ -0.16
TRAF4-214ENST00000580073 PLA2G4AP47712 749 aa14.07□□□□□ -0.16
TRAF4-214ENST00000580073 ENPEPQ07075 957 aa14.07□□□□□ -0.16
TRAF4-214ENST00000580073 INCA1Q0VD86 236 aa14.07□□□□□ -0.16
TRAF4-214ENST00000580073 MESP2Q0VG99 397 aa14.07□□□□□ -0.16
TRAF4-214ENST00000580073 ZNF423Q2M1K9 1284 aa14.07□□□□□ -0.16
TRAF4-214ENST00000580073 WDR45BQ5MNZ6 344 aa14.07□□□□□ -0.16
TRAF4-214ENST00000580073 EMC10Q5UCC4 262 aa14.07□□□□□ -0.16
TRAF4-214ENST00000580073 CEP135Q66GS9 1140 aa14.07□□□□□ -0.16
TRAF4-214ENST00000580073 ANKRD40Q6AI12 368 aa14.07□□□□□ -0.16
TRAF4-214ENST00000580073 PAQR9Q6ZVX9 377 aa14.07□□□□□ -0.16
TRAF4-214ENST00000580073 TMEM25Q86YD3 366 aa14.07□□□□□ -0.16
TRAF4-214ENST00000580073 SFTPA1Q8IWL2 248 aa14.07□□□□□ -0.16
TRAF4-214ENST00000580073 EEF2KMTQ96G04 330 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms