RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 CHKAP35790 457 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 GRIA2P42262 883 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 SLC6A11P48066 632 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 MRE11P49959 708 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 ZNF132P52740 706 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 FZD5Q13467 585 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 DRAP1Q14919 205 aaPredicted RBP6.86□□□□□ -1.31
TRAF4-213ENST00000578917 KRT31Q15323 416 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 SKOR2Q2VWA4 1001 aaPredicted RBP6.86□□□□□ -1.31
TRAF4-213ENST00000578917 FBXO43Q4G163 708 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 C2orf27AQ580R0 203 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 TMEM196Q5HYL7 178 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 MIIPQ5JXC2 388 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 KLHDC7AQ5VTJ3 777 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 HEATR6Q6AI08 1181 aaKnown RBP6.86□□□□□ -1.31
TRAF4-213ENST00000578917 SDE2Q6IQ49 451 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 FSTL4Q6MZW2 842 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 DENND1BQ6P3S1 775 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 Q6ZS52 159 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 RBM43Q6ZSC3 357 aaKnown RBP6.86□□□□□ -1.31
TRAF4-213ENST00000578917 DENND1CQ8IV53 801 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 PASD1Q8IV76 773 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 FMNL3Q8IVF7 1028 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 AOPEPQ8N6M6 819 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 NEK11Q8NG66 645 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 IRGQQ8WZA9 623 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 SHC3Q92529 594 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 NKD2Q969F2 451 aaPredicted RBP6.86□□□□□ -1.31
TRAF4-213ENST00000578917 RNF34Q969K3 372 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 SPAG5Q96R06 1193 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 TRIM62Q9BVG3 475 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 BBS2Q9BXC9 721 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 FBRSL1Q9HCM7 1045 aaKnown RBP6.86□□□□□ -1.31
TRAF4-213ENST00000578917 ACP6Q9NPH0 428 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 ARHGEF4Q9NR80 690 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 SPHK2Q9NRA0 654 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 TMEM63CQ9P1W3 806 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 RAB23Q9ULC3 237 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 CNTN6Q9UQ52 1028 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 DOCK8Q8NF50 2099 aa6.86□□□□□ -1.31
TRAF4-213ENST00000578917 EP300Q09472 2414 aaPredicted RBP6.86□□□□□ -1.31
TRAF4-213ENST00000578917 NOTCH4Q99466 2003 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 SHISA7A6NL88 538 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 GOLGA6L19H0YKK7 550 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 GFRA3O60609 400 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 STC2O76061 302 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 KAT7O95251 611 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 SERPINC1P01008 464 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 LTFP02788 710 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 TYRP14679 529 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 UCHL3P15374 230 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 GPD2P43304 727 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 SLC11A2P49281 568 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 ZNF165P49910 485 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 COPB1P53618 953 aaKnown RBP6.85□□□□□ -1.31
TRAF4-213ENST00000578917 DAOAP59103 153 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 POLR2FP61218 127 aaKnown RBP6.85□□□□□ -1.31
TRAF4-213ENST00000578917 YWHAZP63104 245 aaKnown RBP6.85□□□□□ -1.31
TRAF4-213ENST00000578917 SATB1Q01826 763 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 ARID5AQ03989 594 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 KDSRQ06136 332 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 CCINQ13939 588 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 SYCP1Q15431 976 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 KLHL40Q2TBA0 621 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 ZNF528Q3MIS6 628 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 PKDCCQ504Y2 493 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 CDKAL1Q5VV42 579 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 TAF3Q5VWG9 929 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 NAIF1Q69YI7 327 aaPredicted RBP6.85□□□□□ -1.31
TRAF4-213ENST00000578917 GRAMD4Q6IC98 578 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 OR6B2Q6IFH4 312 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 MAMSTRQ6ZN01 415 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 CEP68Q76N32 757 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 CACNA2D4Q7Z3S7 1137 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 SLC47A2Q86VL8 602 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 CCDC117Q8IWD4 279 aaPredicted RBP6.85□□□□□ -1.31
TRAF4-213ENST00000578917 UNC45BQ8IWX7 931 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 ZNF276Q8N554 614 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 TMEM35BQ8NCS4 154 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 MSANTD4Q8NCY6 345 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 RPLP0P6Q8NHW5 317 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 IPO4Q8TEX9 1081 aaKnown RBP6.85□□□□□ -1.31
TRAF4-213ENST00000578917 DDI1Q8WTU0 396 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 STK32AQ8WU08 396 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 WBP2Q969T9 261 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 PPP1R13BQ96KQ4 1090 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 ZFRQ96KR1 1074 aaKnown RBP6.85□□□□□ -1.31
TRAF4-213ENST00000578917 PHOX2BQ99453 314 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 ZSWIM1Q9BR11 485 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 FAM126AQ9BYI3 521 aaPredicted RBP6.85□□□□□ -1.31
TRAF4-213ENST00000578917 STK33Q9BYT3 514 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 SEMA4AQ9H3S1 761 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 SIX2Q9NPC8 291 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 DNAJC17Q9NVM6 304 aaKnown RBP6.85□□□□□ -1.31
TRAF4-213ENST00000578917 ZSCAN32Q9NX65 697 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 PLK2Q9NYY3 685 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 SFMBT1Q9UHJ3 866 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 SLC12A6Q9UHW9 1150 aa6.85□□□□□ -1.31
TRAF4-213ENST00000578917 HBS1LQ9Y450 684 aaKnown RBP6.85□□□□□ -1.31
TRAF4-213ENST00000578917 PCDHGA2Q9Y5H1 932 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms