RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ATP1A1P05023 1023 aaKnown RBP10.7□□□□□ -0.7
SS18-210ENST00000578700 OR4Q2P0C623 313 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 CTAGE8P0CG41 777 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 ACO1P21399 889 aaKnown RBP10.7□□□□□ -0.7
SS18-210ENST00000578700 PAFAH1B1P43034 410 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 FMO1Q01740 532 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 MRPL58Q14197 206 aaKnown RBP10.7□□□□□ -0.7
SS18-210ENST00000578700 RPS6KA1Q15418 735 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 CLEC16AQ2KHT3 1053 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 ZNF280DQ6N043 979 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 TXNDC11Q6PKC3 985 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 SCARA5Q6ZMJ2 495 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 PEX26Q7Z412 305 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 DAAM2Q86T65 1068 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 CTAGE6Q86UF2 777 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 ARID3BQ8IVW6 561 aaPredicted RBP10.7□□□□□ -0.7
SS18-210ENST00000578700 CTAGE4Q8IX94 777 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 LRRC52Q8N7C0 313 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 MSANTD4Q8NCY6 345 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 APPL2Q8NEU8 664 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 SHKBP1Q8TBC3 707 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 SLC35G2Q8TBE7 412 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 GOLGA1Q92805 767 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 ZNF653Q96CK0 615 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 RSPRY1Q96DX4 576 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 ZNF560Q96MR9 790 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 MMS19Q96T76 1030 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 SELENOOQ9BVL4 669 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 XYLT2Q9H1B5 865 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 SMOC1Q9H4F8 434 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 VRTNQ9H8Y1 702 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 GTSE1Q9NYZ3 720 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 CNTN3Q9P232 1028 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 RNF14Q9UBS8 474 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 AFF4Q9UHB7 1163 aaKnown RBP10.7□□□□□ -0.7
SS18-210ENST00000578700 GTF3C4Q9UKN8 822 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 SNX12Q9UMY4 172 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 TIMM13Q9Y5L4 95 aaPredicted RBP10.7□□□□□ -0.7
SS18-210ENST00000578700 SPEGQ15772 3267 aa10.7□□□□□ -0.7
SS18-210ENST00000578700 SPECC1L-ADORA2AF8WAN1 911 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 CHADO15335 359 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 PAEPP09466 180 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 CD19P15391 556 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 CHRNB2P17787 502 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 CYP3A5P20815 502 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 RPL9P32969 192 aaKnown RBP10.69□□□□□ -0.7
SS18-210ENST00000578700 ASPAP45381 313 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 CDR1P51861 262 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 DUSP4Q13115 394 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 DGKKQ5KSL6 1271 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 STXBP5Q5T5C0 1151 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 ALKAL1Q6UXT8 129 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 TMEM130Q8N3G9 435 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 LEMD2Q8NC56 503 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 TMEM35BQ8NCS4 154 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 TPCN2Q8NHX9 752 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 E2F7Q96AV8 911 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 ELMO3Q96BJ8 720 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 SUSD3Q96L08 255 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 ZNF518BQ9C0D4 1074 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 THAP2Q9H0W7 228 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 ATXN3LQ9H3M9 355 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 TRPV4Q9HBA0 871 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 RXFP3Q9NSD7 469 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 UVRAGQ9P2Y5 699 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 LCMT1Q9UIC8 334 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 AMFRQ9UKV5 643 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 KIAA1257Q9ULG3 409 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 SLC27A5Q9Y2P5 690 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 NBEAQ8NFP9 2946 aa10.69□□□□□ -0.7
SS18-210ENST00000578700 DSPP15924 2871 aaKnown RBP10.69□□□□□ -0.7
SS18-210ENST00000578700 MYBPHLA2RUH7 354 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 ARNTLO00327 626 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 FOXD2O60548 495 aaPredicted RBP10.68□□□□□ -0.7
SS18-210ENST00000578700 CALB1P05937 261 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 KCNE1P15382 129 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 PMLP29590 882 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 CTHP32929 405 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 ALDH1A3P47895 512 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 ZNF132P52740 706 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 EPHB3P54753 998 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 HADHBP55084 474 aaKnown RBP10.68□□□□□ -0.7
SS18-210ENST00000578700 AMPD2Q01433 879 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 YWHAHQ04917 246 aaPredicted RBP10.68□□□□□ -0.7
SS18-210ENST00000578700 TCEAL1Q15170 157 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 SV2CQ496J9 727 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 CFAP221Q4G0U5 840 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 XKR4Q5GH76 650 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 STPG1Q5TH74 334 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 MEI1Q5TIA1 1274 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 C11orf63Q6NUN7 778 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 KBTBD6Q86V97 674 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 WDR5BQ86VZ2 330 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 UBL4BQ8N7F7 174 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 VCPIP1Q96JH7 1222 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 LRRC3BQ96PB8 259 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 OSBPL9Q96SU4 736 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 PCDHB18PQ96TA0 734 aa10.68□□□□□ -0.7
SS18-210ENST00000578700 MRPL47Q9HD33 250 aaKnown RBP10.68□□□□□ -0.7
SS18-210ENST00000578700 SIX4Q9UIU6 781 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms