RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CDC42EP4Q9H3Q1 356 aaKnown RBP11.57□□□□□ -0.56
SKA2-204ENST00000578519 SEMA4AQ9H3S1 761 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 CRTAC1Q9NQ79 661 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 METRNQ9UJH8 293 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 NOVA2Q9UNW9 492 aaKnown RBP11.57□□□□□ -0.56
SKA2-204ENST00000578519 TRIM17Q9Y577 477 aa11.57□□□□□ -0.56
SKA2-204ENST00000578519 MYBPHLA2RUH7 354 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 MEIS3P2A8K0S8 358 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 H7C4K7 107 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 M0QYT0 321 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 CLDN5O00501 218 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 NCAM2O15394 837 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 ALDH2P05091 517 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 TKTP29401 623 aaKnown RBP11.56□□□□□ -0.56
SKA2-204ENST00000578519 L1CAMP32004 1257 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 HTR7P34969 479 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 OR1G1P47890 313 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 HCAR3P49019 387 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 CTCFP49711 727 aaPredicted RBP11.56□□□□□ -0.56
SKA2-204ENST00000578519 CDK7P50613 346 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 PPP2R2AP63151 447 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 MMRN1Q13201 1228 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 PDCD11Q14690 1871 aaKnown RBP11.56□□□□□ -0.56
SKA2-204ENST00000578519 TAF5Q15542 800 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 PPP6R3Q5H9R7 873 aaPredicted RBP11.56□□□□□ -0.56
SKA2-204ENST00000578519 KCTD16Q68DU8 428 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 MFSD5Q6N075 450 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 C1orf228Q6PIY5 440 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 PAQR9Q6ZVX9 377 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 ANKS1BQ7Z6G8 1248 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 PLD5Q8N7P1 536 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 NT5C3BQ969T7 300 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 PGAP3Q96FM1 320 aaPredicted RBP11.56□□□□□ -0.56
SKA2-204ENST00000578519 FUBP3Q96I24 572 aaKnown RBP eCLIP11.56□□□□□ -0.56
SKA2-204ENST00000578519 PEBP4Q96S96 227 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 NPY6RQ99463 290 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 LPIN3Q9BQK8 851 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 ULBP1Q9BZM6 244 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 NRDE2Q9H7Z3 1164 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 SAYSD1Q9NPB0 183 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 FZD10Q9ULW2 581 aa11.56□□□□□ -0.56
SKA2-204ENST00000578519 SF3B1O75533 1304 aaKnown RBP eCLIP11.56□□□□□ -0.567e-6■■■■■ 33.4
SKA2-204ENST00000578519 TRIP12Q14669 1992 aaPredicted RBP11.56□□□□□ -0.56
SKA2-204ENST00000578519 OR6C75A6NL08 312 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 DCDC2CA8MYV0 355 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 E7EVH7 732 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 PPP1R12AO14974 1030 aaPredicted RBP11.55□□□□□ -0.56
SKA2-204ENST00000578519 TRIM66O15016 1216 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 ALOX15BO15296 676 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 CHADO15335 359 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 MTSS1O43312 755 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 SHOX2O60902 331 aaPredicted RBP11.55□□□□□ -0.56
SKA2-204ENST00000578519 SPAG6O75602 509 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 CD48P09326 243 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 RPL22P35268 128 aaKnown RBP11.55□□□□□ -0.56
SKA2-204ENST00000578519 BRCC3P46736 316 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 GYS2P54840 703 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 GNGT1P63211 74 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 ADCY1Q08828 1119 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 MTA1Q13330 715 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 PDK1Q15118 436 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 HIF1AQ16665 826 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 DNAJC21Q5F1R6 531 aaKnown RBP11.55□□□□□ -0.56
SKA2-204ENST00000578519 RNASEH2BQ5TBB1 312 aaKnown RBP11.55□□□□□ -0.56
SKA2-204ENST00000578519 SH3PXD2AQ5TCZ1 1133 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 PM20D1Q6GTS8 502 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 TRNP1Q6NT89 227 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 VSTM1Q6UX27 236 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 SLC7A14Q8TBB6 771 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 PYROXD1Q8WU10 500 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 MYLPFQ96A32 169 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 RTP4Q96DX8 246 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 PIWIL1Q96J94 861 aaKnown RBP11.55□□□□□ -0.56
SKA2-204ENST00000578519 SMOQ99835 787 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 FAM118BQ9BPY3 351 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 TMEM175Q9BSA9 504 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 FBXO44Q9H4M3 255 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 PRDM10Q9NQV6 1147 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 ABCC13Q9NSE7 274 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 COMMD8Q9NX08 183 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 DONSONQ9NYP3 566 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 HEY1Q9Y5J3 304 aa11.55□□□□□ -0.56
SKA2-204ENST00000578519 TIMM13Q9Y5L4 95 aaPredicted RBP11.55□□□□□ -0.56
SKA2-204ENST00000578519 SCN1AP35498 2009 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 EEF2KO00418 725 aaKnown RBP11.54□□□□□ -0.56
SKA2-204ENST00000578519 KCNN4O15554 427 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 HCRTO43612 131 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 CDH16O75309 829 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 OAZ2O95190 189 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 GSTA2P09210 222 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 NCAM1P13591 858 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 SERPINB6P35237 376 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 FDFT1P37268 417 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 GRIK1P39086 918 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 MDH1P40925 334 aaKnown RBP11.54□□□□□ -0.56
SKA2-204ENST00000578519 MAGOHP61326 146 aaKnown RBP11.54□□□□□ -0.56
SKA2-204ENST00000578519 BASP1P80723 227 aaKnown RBP11.54□□□□□ -0.56
SKA2-204ENST00000578519 COG7P83436 770 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 CDK16Q00536 496 aa11.54□□□□□ -0.56
SKA2-204ENST00000578519 DSC1Q08554 894 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms