RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 EMC10Q5UCC4 262 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 SHC4Q6S5L8 630 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 TMEM25Q86YD3 366 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 MINDY1Q8N5J2 469 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 GLIS3Q8NEA6 775 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 BBS2Q9BXC9 721 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 APOBEC2Q9Y235 224 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 K7ELQ4 463 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 CLIC2O15247 247 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 CALUO43852 315 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 CER1O95813 267 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 NDUFV2P19404 249 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 GTF2H1P32780 548 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 CEBPZQ03701 1054 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 RESP18Q5W5W9 173 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 CEP57L1Q8IYX8 460 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 ZNF557Q8N988 423 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 RDH13Q8NBN7 331 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 CCDC150Q8NCX0 1101 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 RLN3Q8WXF3 142 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 FAM84AQ96KN4 292 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 KCNK16Q96T55 309 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 PANK2Q9BZ23 570 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 ITM2CQ9NQX7 267 aa11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 THAP10Q9P2Z0 257 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-214ENST00000578112 HHLA1C9JL84 531 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 VNN1O95497 513 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 MAPK8P45983 427 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 SIM1P81133 766 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 EGFLAMQ63HQ2 1017 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 FAM217AQ8IXS0 508 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 CHPFQ8IZ52 775 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 TRIML1Q8N9V2 468 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 ENGASEQ8NFI3 743 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 SCAMP5Q8TAC9 235 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 WFIKKN2Q8TEU8 576 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 CCDC47Q96A33 483 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 NT5C1AQ9BXI3 368 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 SDCBP2Q9H190 292 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 CHORDC1Q9UHD1 332 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 CFAP45Q9UL16 551 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 HCN2Q9UL51 889 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 TRAF3IP3Q9Y228 551 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 USP3Q9Y6I4 520 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 DMXL1Q9Y485 3027 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 ACO1P21399 889 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 ASPAP45381 313 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 NDST1P52848 882 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 IFRD2Q12894 506 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 CLEC20AQ6ZU45 233 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 INTS8Q75QN2 995 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 SLC41A1Q8IVJ1 513 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 NELFCDQ8IXH7 590 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 SLC2A14Q8TDB8 520 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 PLD4Q96BZ4 506 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 MRGPRX1Q96LB2 322 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 CDC6Q99741 560 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 OLA1Q9NTK5 396 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 EXOC1Q9NV70 894 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 WSB2Q9NYS7 404 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 TPX2Q9ULW0 747 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 FRMD4BQ9Y2L6 1034 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 PCDHB9Q9Y5E1 797 aa11.83□□□□□ -0.52
SMARCE1-214ENST00000578112 ACACBO00763 2458 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 ATG2BQ96BY7 2078 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 NEDD8-MDP1E9PL57 170 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 STX10O60499 249 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 CAPNS1P04632 268 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 CYBBP04839 570 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 SLFN14P0C7P3 912 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 RARGP13631 454 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 MESP2Q0VG99 397 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 ORC1Q13415 861 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 FAM173BQ6P4H8 233 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 LRSAM1Q6UWE0 723 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 ARMCX6Q7L4S7 300 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 ACOT1Q86TX2 421 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 NAXDQ8IW45 347 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 HPS3Q969F9 1004 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 SNX21Q969T3 373 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 KCTD10Q9H3F6 313 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 POLR2DO15514 142 aaKnown RBP11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 KIF11P52732 1056 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 ZBTB16Q05516 673 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 DBX2Q6ZNG2 339 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 ANKS1BQ7Z6G8 1248 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 SFTPA1Q8IWL2 248 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 SCML4Q8N228 414 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 NAT16Q8N8M0 369 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 PLEKHO2Q8TD55 490 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 HSPA12BQ96MM6 686 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 SCUBE2Q9NQ36 999 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 CIZ1Q9ULV3 898 aaPredicted RBP11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 STON1Q9Y6Q2 735 aa11.82□□□□□ -0.52
SMARCE1-214ENST00000578112 PAPSS1O43252 624 aaPredicted RBP11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 HYAL3O43820 417 aaPredicted RBP11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 KLRC4O43908 158 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 DFNA5O60443 496 aa11.81□□□□□ -0.52
SMARCE1-214ENST00000578112 DKK1O94907 266 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms