RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 HFE2Q6ZVN8 426 aa28.8■■■□□ 2.2
LIMD2-203ENST00000578067 GPRIN1Q7Z2K8 1008 aa28.8■■■□□ 2.2
LIMD2-203ENST00000578067 FAM131BQ86XD5 332 aa28.8■■■□□ 2.2
LIMD2-203ENST00000578067 PSTKQ8IV42 348 aaKnown RBP28.8■■■□□ 2.2
LIMD2-203ENST00000578067 THEM5Q8N1Q8 247 aa28.8■■■□□ 2.2
LIMD2-203ENST00000578067 FZD10Q9ULW2 581 aa28.8■■■□□ 2.2
LIMD2-203ENST00000578067 HEY1Q9Y5J3 304 aa28.8■■■□□ 2.2
LIMD2-203ENST00000578067 TSC2P49815 1807 aa28.8■■■□□ 2.2
LIMD2-203ENST00000578067 FRMPD3Q5JV73 1810 aa28.79■■■□□ 2.2
LIMD2-203ENST00000578067 DCDC2CA8MYV0 355 aa28.79■■■□□ 2.2
LIMD2-203ENST00000578067 ITGB1P05556 798 aa28.79■■■□□ 2.2
LIMD2-203ENST00000578067 SYPL2Q5VXT5 272 aa28.79■■■□□ 2.2
LIMD2-203ENST00000578067 LRRC8DQ7L1W4 858 aa28.79■■■□□ 2.2
LIMD2-203ENST00000578067 FTHL17Q9BXU8 183 aa28.79■■■□□ 2.2
LIMD2-203ENST00000578067 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.79■■■□□ 2.2
LIMD2-203ENST00000578067 SAYSD1Q9NPB0 183 aa28.79■■■□□ 2.2
LIMD2-203ENST00000578067 HTTP42858 3142 aa28.79■■■□□ 2.2
LIMD2-203ENST00000578067 ZFXP17010 805 aaPredicted RBP28.79■■■□□ 2.2
LIMD2-203ENST00000578067 TYMPP19971 482 aa28.79■■■□□ 2.2
LIMD2-203ENST00000578067 PITX1P78337 314 aaPredicted RBP28.79■■■□□ 2.2
LIMD2-203ENST00000578067 NOMO2Q5JPE7 1267 aa28.79■■■□□ 2.2
LIMD2-203ENST00000578067 CLLU1OSQ5K130 101 aa28.79■■■□□ 2.2
LIMD2-203ENST00000578067 URGCPQ8TCY9 931 aa28.79■■■□□ 2.2
LIMD2-203ENST00000578067 CPT1BQ92523 772 aa28.79■■■□□ 2.2
LIMD2-203ENST00000578067 PKMYT1Q99640 499 aa28.79■■■□□ 2.2
LIMD2-203ENST00000578067 MAGEB5Q9BZ81 275 aa28.79■■■□□ 2.2
LIMD2-203ENST00000578067 M0QYT0 321 aa28.78■■■□□ 2.2
LIMD2-203ENST00000578067 SELPP16109 830 aa28.78■■■□□ 2.2
LIMD2-203ENST00000578067 PPP2R2AP63151 447 aa28.78■■■□□ 2.2
LIMD2-203ENST00000578067 C9orf72Q96LT7 481 aa28.78■■■□□ 2.2
LIMD2-203ENST00000578067 CSPG4P5Q96PW8 444 aa28.78■■■□□ 2.2
LIMD2-203ENST00000578067 RHOBTB2Q9BYZ6 727 aa28.78■■■□□ 2.2
LIMD2-203ENST00000578067 NAALADL1Q9UQQ1 740 aa28.78■■■□□ 2.2
LIMD2-203ENST00000578067 YJEFN3A6XGL0 299 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 E7ENQ6 273 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 CAPN9O14815 690 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 FYNP06241 537 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 DSC1Q08554 894 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 TTC19Q6DKK2 380 aaPredicted RBP28.77■■■□□ 2.2
LIMD2-203ENST00000578067 B4GALNT4Q76KP1 1039 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 ZNF280BQ86YH2 543 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 OR10T2Q8NGX3 314 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 SEZ6LQ9BYH1 1024 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 USP29Q9HBJ7 922 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 PCDHB8Q9UN66 801 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 CFAP69A5D8W1 941 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 F8W810 466 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 DDHD2O94830 711 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 ZBED1O96006 694 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 AGTP01019 485 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 USP17L7P0C7H9 530 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 SLCO1A2P46721 670 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 CDK7P50613 346 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 DEUP1Q05D60 604 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 AUHQ13825 339 aaKnown RBP28.77■■■□□ 2.2
LIMD2-203ENST00000578067 MAPRE1Q15691 268 aaKnown RBP28.77■■■□□ 2.2
LIMD2-203ENST00000578067 MFSD5Q6N075 450 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 NAT8LQ8N9F0 302 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 STMN4Q9H169 189 aaPredicted RBP28.77■■■□□ 2.2
LIMD2-203ENST00000578067 TMLHEQ9NVH6 421 aa28.77■■■□□ 2.2
LIMD2-203ENST00000578067 CWC15Q9P013 229 aaKnown RBP28.77■■■□□ 2.2
LIMD2-203ENST00000578067 SMAPO00193 183 aa28.76■■■□□ 2.19
LIMD2-203ENST00000578067 BDNFP23560 247 aa28.76■■■□□ 2.19
LIMD2-203ENST00000578067 MDH1P40925 334 aaKnown RBP28.76■■■□□ 2.19
LIMD2-203ENST00000578067 CENPUQ71F23 418 aa28.76■■■□□ 2.19
LIMD2-203ENST00000578067 TTC25Q96NG3 672 aa28.76■■■□□ 2.19
LIMD2-203ENST00000578067 SERPINB12Q96P63 405 aa28.76■■■□□ 2.19
LIMD2-203ENST00000578067 RCOR3Q9P2K3 495 aaPredicted RBP28.76■■■□□ 2.19
LIMD2-203ENST00000578067 KANSL3Q9P2N6 904 aa28.76■■■□□ 2.19
LIMD2-203ENST00000578067 BCLAF3A2AJT9 711 aaKnown RBP28.76■■■□□ 2.19
LIMD2-203ENST00000578067 B4GALT3O60512 393 aa28.76■■■□□ 2.19
LIMD2-203ENST00000578067 ARL4AP40617 200 aa28.76■■■□□ 2.19
LIMD2-203ENST00000578067 TSPY1Q01534 308 aa28.76■■■□□ 2.19
LIMD2-203ENST00000578067 LONRF1Q17RB8 773 aa28.76■■■□□ 2.19
LIMD2-203ENST00000578067 LRRC31Q6UY01 552 aa28.76■■■□□ 2.19
LIMD2-203ENST00000578067 LRRTM3Q86VH5 581 aa28.76■■■□□ 2.19
LIMD2-203ENST00000578067 PYROXD2Q8N2H3 581 aa28.76■■■□□ 2.19
LIMD2-203ENST00000578067 TMEM209Q96SK2 561 aa28.76■■■□□ 2.19
LIMD2-203ENST00000578067 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP28.75■■■□□ 2.19
LIMD2-203ENST00000578067 SYNJ2BP-COX16A0A087WUM0 186 aa28.75■■■□□ 2.19
LIMD2-203ENST00000578067 EIF3HO15372 352 aaKnown RBP eCLIP28.75■■■□□ 2.19
LIMD2-203ENST00000578067 TCEA3O75764 348 aa28.75■■■□□ 2.19
LIMD2-203ENST00000578067 LTFP02788 710 aa28.75■■■□□ 2.19
LIMD2-203ENST00000578067 ABHD2P08910 425 aa28.75■■■□□ 2.19
LIMD2-203ENST00000578067 NR2C2P49116 596 aa28.75■■■□□ 2.19
LIMD2-203ENST00000578067 GUCY1A3Q02108 690 aa28.75■■■□□ 2.19
LIMD2-203ENST00000578067 NME3Q13232 169 aa28.75■■■□□ 2.19
LIMD2-203ENST00000578067 ANKRD22Q5VYY1 191 aa28.75■■■□□ 2.19
LIMD2-203ENST00000578067 COLGALT2Q8IYK4 626 aa28.75■■■□□ 2.19
LIMD2-203ENST00000578067 SH3TC2Q8TF17 1288 aa28.75■■■□□ 2.19
LIMD2-203ENST00000578067 RTP4Q96DX8 246 aa28.75■■■□□ 2.19
LIMD2-203ENST00000578067 PHACTR1Q9C0D0 580 aa28.75■■■□□ 2.19
LIMD2-203ENST00000578067 DMAP1Q9NPF5 467 aaPredicted RBP28.75■■■□□ 2.19
LIMD2-203ENST00000578067 COX16Q9P0S2 106 aa28.75■■■□□ 2.19
LIMD2-203ENST00000578067 SLC12A6Q9UHW9 1150 aa28.75■■■□□ 2.19
LIMD2-203ENST00000578067 TRIM17Q9Y577 477 aa28.75■■■□□ 2.19
LIMD2-203ENST00000578067 USP3Q9Y6I4 520 aa28.75■■■□□ 2.19
LIMD2-203ENST00000578067 ALOX15BO15296 676 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 KCNN4O15554 427 aa28.74■■■□□ 2.19
LIMD2-203ENST00000578067 BFSP2Q13515 415 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms