RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 MAFFQ9ULX9 164 aa19.34■□□□□ 0.69
PRKCA-203ENST00000578063 YWHAQP27348 245 aa19.33■□□□□ 0.68
PRKCA-203ENST00000578063 FNTAP49354 379 aa19.33■□□□□ 0.68
PRKCA-203ENST00000578063 ARSEP51690 589 aa19.33■□□□□ 0.68
PRKCA-203ENST00000578063 ATXN1P54253 815 aaKnown RBP19.33■□□□□ 0.68
PRKCA-203ENST00000578063 AIF1P55008 147 aa19.33■□□□□ 0.68
PRKCA-203ENST00000578063 PITX1P78337 314 aaPredicted RBP19.33■□□□□ 0.68
PRKCA-203ENST00000578063 MAATS1Q7Z4T9 603 aa19.33■□□□□ 0.68
PRKCA-203ENST00000578063 FAM131BQ86XD5 332 aa19.33■□□□□ 0.68
PRKCA-203ENST00000578063 KLHL23Q8NBE8 558 aa19.33■□□□□ 0.68
PRKCA-203ENST00000578063 ANKRD7Q92527 254 aa19.33■□□□□ 0.68
PRKCA-203ENST00000578063 EDEM1Q92611 657 aa19.33■□□□□ 0.68
PRKCA-203ENST00000578063 MAGOHBQ96A72 148 aaKnown RBP19.33■□□□□ 0.68
PRKCA-203ENST00000578063 PARD6BQ9BYG5 372 aa19.33■□□□□ 0.68
PRKCA-203ENST00000578063 LRRC19Q9H756 370 aa19.33■□□□□ 0.68
PRKCA-203ENST00000578063 RXFP1Q9HBX9 757 aa19.33■□□□□ 0.68
PRKCA-203ENST00000578063 TMEM51Q9NW97 253 aa19.33■□□□□ 0.68
PRKCA-203ENST00000578063 NR2E3Q9Y5X4 410 aa19.33■□□□□ 0.68
PRKCA-203ENST00000578063 LCHNA4D1U4 455 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 ZNF487B1APH4 448 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 RAD51CO43502 376 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 SOAT2O75908 522 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 KRT10P13645 584 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 DNAJB2P25686 324 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 PSEN1P49768 467 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 USP46P62068 366 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 NME3Q13232 169 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 DHX34Q14147 1143 aaKnown RBP19.32■□□□□ 0.68
PRKCA-203ENST00000578063 DPYSL2Q16555 572 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 KAZNQ674X7 775 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 SCD5Q86SK9 330 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 FAM71BQ8TC56 605 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 FBXO32Q969P5 355 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 NTAN1Q96AB6 310 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 CALN1Q9BXU9 219 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 PIGVQ9NUD9 493 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 DDIT4Q9NX09 232 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 STIM2Q9P246 746 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 AP4E1Q9UPM8 1137 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 LZTS1Q9Y250 596 aa19.32■□□□□ 0.68
PRKCA-203ENST00000578063 A0A1W2PQH9 124 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 LILRB3O75022 631 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 ATF6P18850 670 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 GBP1P32455 592 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 CTNNB1P35222 781 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 BMPR1AP36894 532 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 DPYSL3Q14195 570 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 WDR93Q6P2C0 686 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 SND1Q7KZF4 910 aaKnown RBP eCLIP19.31■□□□□ 0.68
PRKCA-203ENST00000578063 CCDC185Q8N715 623 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 DQX1Q8TE96 717 aaKnown RBP19.31■□□□□ 0.68
PRKCA-203ENST00000578063 PNKPQ96T60 521 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 ZNF670Q9BS34 389 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 SMOC2Q9H3U7 446 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 PCDH18Q9HCL0 1135 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 ARGLU1Q9NWB6 273 aaPredicted RBP19.31■□□□□ 0.68
PRKCA-203ENST00000578063 RAB21Q9UL25 225 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 PLXNA3P51805 1871 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 SYNJ2BP-COX16A0A087WUM0 186 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 SLC38A8A6NNN8 435 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 CD48P09326 243 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 ZC3H12AQ5D1E8 599 aaKnown RBP19.31■□□□□ 0.68
PRKCA-203ENST00000578063 BBS12Q6ZW61 710 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 TAC4Q86UU9 113 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 STKLD1Q8NE28 680 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 GPR152Q8TDT2 470 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 RNF139Q8WU17 664 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 AUTS2Q8WXX7 1259 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 TTLL2Q9BWV7 592 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 DCLK3Q9C098 648 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 NMUR1Q9HB89 426 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 CYP4F11Q9HBI6 524 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 WDR6Q9NNW5 1121 aaKnown RBP19.31■□□□□ 0.68
PRKCA-203ENST00000578063 GPATCH2LQ9NWQ4 482 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 CLIC5Q9NZA1 410 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 COX16Q9P0S2 106 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 GMIPQ9P107 970 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 PCYOX1Q9UHG3 505 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 AMACRQ9UHK6 382 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 FZD10Q9ULW2 581 aa19.31■□□□□ 0.68
PRKCA-203ENST00000578063 TEX28O15482 410 aa19.3■□□□□ 0.68
PRKCA-203ENST00000578063 IGLV3-25P01717 112 aa19.3■□□□□ 0.68
PRKCA-203ENST00000578063 COILP38432 576 aaPredicted RBP19.3■□□□□ 0.68
PRKCA-203ENST00000578063 DR1Q01658 176 aa19.3■□□□□ 0.68
PRKCA-203ENST00000578063 SCAPQ12770 1279 aa19.3■□□□□ 0.68
PRKCA-203ENST00000578063 TFDP2Q14188 446 aa19.3■□□□□ 0.68
PRKCA-203ENST00000578063 CCNG2Q16589 344 aa19.3■□□□□ 0.68
PRKCA-203ENST00000578063 ARL13BQ3SXY8 428 aa19.3■□□□□ 0.68
PRKCA-203ENST00000578063 CCDC137Q6PK04 289 aaKnown RBP19.3■□□□□ 0.68
PRKCA-203ENST00000578063 ADAM32Q8TC27 787 aa19.3■□□□□ 0.68
PRKCA-203ENST00000578063 MAK16Q9BXY0 300 aaKnown RBP19.3■□□□□ 0.68
PRKCA-203ENST00000578063 FRMD8P1Q9BZ68 369 aaPredicted RBP19.3■□□□□ 0.68
PRKCA-203ENST00000578063 DHX35Q9H5Z1 703 aaKnown RBP19.3■□□□□ 0.68
PRKCA-203ENST00000578063 TLR8Q9NR97 1041 aaKnown RBP19.3■□□□□ 0.68
PRKCA-203ENST00000578063 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.3■□□□□ 0.68
PRKCA-203ENST00000578063 DMGDHQ9UI17 866 aaKnown RBP19.3■□□□□ 0.68
PRKCA-203ENST00000578063 YIPF1Q9Y548 306 aa19.3■□□□□ 0.68
PRKCA-203ENST00000578063 LINC01553A4QN01 128 aa19.29■□□□□ 0.68
PRKCA-203ENST00000578063 HEXIM1O94992 359 aaKnown RBP19.29■□□□□ 0.68
PRKCA-203ENST00000578063 SEC24AO95486 1093 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms