RNA–Protein interactions for RNA: ENST00000577667.1

PPP4R1-205, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-205	ENST00000577667	MT-CO3	P00414	261 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	APEH	P13798	732 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	BRAF	P15056	766 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	PHKG2	P15735	406 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	KLRC1	P26715	233 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	UQCRC1	P31930	480 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	NR4A2	P43354	598 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	DIO1	P49895	249 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	COPB1	P53618	953 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	SUMO3	P55854	103 aa	Predicted RBP	4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	LAMB3	Q13751	1172 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	AWAT1	Q58HT5	328 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	MEX3C	Q5U5Q3	659 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	DENND2C	Q68D51	928 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	AWAT2	Q6E213	333 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	KCTD20	Q7Z5Y7	419 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	KRT73	Q86Y46	540 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	PIGO	Q8TEQ8	1089 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	CUL5	Q93034	780 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	TMEM79	Q9BSE2	394 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	TRIM5	Q9C035	493 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	SNX15	Q9NRS6	342 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	SACM1L	Q9NTJ5	587 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	CPNE7	Q9UBL6	633 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	CFDP1	Q9UEE9	299 aa	Predicted RBP	4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	AFG3L2	Q9Y4W6	797 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	ZNF644	Q9H582	1327 aa	Predicted RBP	4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	RTEL1-TNFRSF6B	F6WH68	1400 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	NCOA2	Q15596	1464 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	SCAF11	Q99590	1463 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	MAP3K1	Q13233	1512 aa		4.11	□□□□□ -1.75
PPP4R1-205	ENST00000577667	LRP6	O75581	1613 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	GOLGB1	Q14789	3259 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667		H7C4K7	107 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	ADAM10	O14672	748 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	CD3EAP	O15446	510 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	CCP110	O43303	1012 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	SPRY2	O43597	315 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	RRP9	O43818	475 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	RASSF9	O75901	435 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	A1BG	P04217	495 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	PTDSS1	P48651	473 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	ITGA8	P53708	1063 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	LARS2	Q15031	903 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	LRRC41	Q15345	812 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	CNN3	Q15417	329 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	ZNF260	Q3ZCT1	412 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	C4orf46	Q504U0	113 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	ODR4	Q5SWX8	454 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	CXorf57	Q6NSI4	855 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	TMEM65	Q6PI78	240 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	APOA5	Q6Q788	366 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	SHC4	Q6S5L8	630 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	KIAA0319L	Q8IZA0	1049 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	FAM177A1	Q8N128	213 aa	Predicted RBP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	OSR1	Q8TAX0	266 aa	Predicted RBP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	PNISR	Q8TF01	805 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	CTHRC1	Q96CG8	243 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	ZBTB45	Q96K62	511 aa	Predicted RBP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	KRTAP1-5	Q9BYS1	174 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	AFF4	Q9UHB7	1163 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	NOB1	Q9ULX3	412 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	THRAP3	Q9Y2W1	955 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	TMEM94	Q12767	1356 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	JCAD	Q9P266	1359 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	ERVK-7	P63135	1459 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	FYCO1	Q9BQS8	1478 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	ARHGAP23	Q9P227	1491 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	ABCC3	O15438	1527 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	SLIT1	O75093	1534 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	TIAM1	Q13009	1591 aa		4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	COL16A1	Q07092	1604 aa	Predicted RBP	4.1	□□□□□ -1.75
PPP4R1-205	ENST00000577667	ISM1	B1AKI9	464 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	SOCS2	O14508	198 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	FRS3	O43559	492 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	TMPRSS11D	O60235	418 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	NTN1	O95631	604 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	FGB	P02675	491 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	HGF	P14210	728 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	CREB1	P16220	341 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	POLG	P54098	1239 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	TIRAP	P58753	221 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	GHRHR	Q02643	423 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	FHL1	Q13642	323 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	DCDC5	Q6ZRR9	648 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	MRPL10	Q7Z7H8	261 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	RAVER1	Q8IY67	606 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	LINC01465	Q8N7H1	131 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	MAFA	Q8NHW3	353 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	ZNF398	Q8TD17	642 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	NMD3	Q96D46	503 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	COQ8B	Q96D53	544 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	WDYHV1	Q96HA8	205 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	HS6ST2	Q96MM7	605 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	STK31	Q9BXU1	1019 aa		4.09	□□□□□ -1.75
PPP4R1-205	ENST00000577667	HDAC9	Q9UKV0	1011 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms