RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 MIPOL1Q8TD10 442 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 SLC2A14Q8TDB8 520 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 GRK7Q8WTQ7 553 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 PCMTD2Q9NV79 361 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 GRHL1Q9NZI5 618 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 SNX24Q9Y343 169 aa14.37□□□□□ -0.11
RNF43-202ENST00000577625 EIF4E1BA6NMX2 242 aaKnown RBP14.36□□□□□ -0.11
RNF43-202ENST00000577625 KBTBD13C9JR72 458 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 PI4K2BG5E9Z4 385 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 MAP3K13O43283 966 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 POMCP01189 267 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 SP100P23497 879 aaPredicted RBP14.36□□□□□ -0.11
RNF43-202ENST00000577625 SNX16P57768 344 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 SPDYCQ5MJ68 293 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 SPOCD1Q6ZMY3 1216 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 SYDE1Q6ZW31 735 aaPredicted RBP14.36□□□□□ -0.11
RNF43-202ENST00000577625 ASRGL1Q7L266 308 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 RTN4RL1Q86UN2 441 aaPredicted RBP14.36□□□□□ -0.11
RNF43-202ENST00000577625 HOOK3Q86VS8 718 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 KCNV2Q8TDN2 545 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 ATG4AQ8WYN0 398 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 PGBD4Q96DM1 585 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 FMO2Q99518 471 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 UNC93B1Q9H1C4 597 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 STK38LQ9Y2H1 464 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 R3HDM2Q9Y2K5 976 aaKnown RBP14.36□□□□□ -0.11
RNF43-202ENST00000577625 PTPN22Q9Y2R2 807 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 C2CD4BA6NLJ0 364 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 PAPSS1O43252 624 aaPredicted RBP14.36□□□□□ -0.11
RNF43-202ENST00000577625 TJP3O95049 919 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 SKIP12755 728 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 ACADSP16219 412 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 GPD1P21695 349 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 ACAT1P24752 427 aaKnown RBP14.36□□□□□ -0.11
RNF43-202ENST00000577625 IL1R2P27930 398 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 FLT3P36888 993 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 RPL21P46778 160 aaKnown RBP14.36□□□□□ -0.11
RNF43-202ENST00000577625 RPL34P49207 117 aaKnown RBP14.36□□□□□ -0.11
RNF43-202ENST00000577625 ZNF143P52747 638 aaPredicted RBP14.36□□□□□ -0.11
RNF43-202ENST00000577625 TFDP3Q5H9I0 405 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 KIAA0319Q5VV43 1072 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 TMEM154Q6P9G4 183 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 ZDHHC24Q6UX98 284 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 ZDHHC17Q8IUH5 632 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 LINC01599Q8WXQ3 324 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 ACSF2Q96CM8 615 aaPredicted RBP14.36□□□□□ -0.11
RNF43-202ENST00000577625 ZCWPW1Q9H0M4 648 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 ZWILCHQ9H900 591 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 ASNSD1Q9NWL6 643 aa14.36□□□□□ -0.11
RNF43-202ENST00000577625 PTPRDP23468 1912 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 hCG_1818297A0A087WSY0 165 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 INPPL1O15357 1258 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 CAPN15O75808 1086 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 OAS1P00973 400 aaKnown RBP14.35□□□□□ -0.11
RNF43-202ENST00000577625 TPP2P29144 1249 aaPredicted RBP14.35□□□□□ -0.11
RNF43-202ENST00000577625 CDKN2BP42772 138 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 MMP13P45452 471 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 KRT17Q04695 432 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 SCN5AQ14524 2016 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 TMC3Q7Z5M5 1100 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 TMEM86AQ8N2M4 240 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 KHSRPQ92945 711 aaKnown RBP eCLIP14.35□□□□□ -0.11
RNF43-202ENST00000577625 RAB3IPQ96QF0 476 aaPredicted RBP14.35□□□□□ -0.11
RNF43-202ENST00000577625 HNRNPABQ99729 332 aaKnown RBP14.35□□□□□ -0.11
RNF43-202ENST00000577625 CNPY3Q9BT09 278 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 B3GNT5Q9BYG0 378 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 UBN1Q9NPG3 1134 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 CYLDQ9NQC7 956 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 RGS18Q9NS28 235 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 EFR3BQ9Y2G0 817 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 INPP5FQ9Y2H2 1132 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 TANC1Q9C0D5 1861 aa14.35□□□□□ -0.11
RNF43-202ENST00000577625 C9IYK1 514 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 SNX3O60493 162 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 GRAP2O75791 330 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 GAS8O95995 478 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 GSTA2P09210 222 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 KRT10P13645 584 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 PTPN1P18031 435 aaKnown RBP14.34□□□□□ -0.11
RNF43-202ENST00000577625 CDK7P50613 346 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 PLTPP55058 493 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 POLE2P56282 527 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 SLC6A3Q01959 620 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 TAF5Q15542 800 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 TIGD5Q53EQ6 642 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 FBXO25Q8TCJ0 367 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 RXFP2Q8WXD0 754 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 IFT43Q96FT9 208 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 RNPEPL1Q9HAU8 725 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 DDX43Q9NXZ2 648 aaKnown RBP14.34□□□□□ -0.11
RNF43-202ENST00000577625 C3orf70A6NLC5 250 aaPredicted RBP14.34□□□□□ -0.11
RNF43-202ENST00000577625 DPYSL4O14531 572 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 PDHA1P08559 390 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 PDGFRAP16234 1089 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 CALB2P22676 271 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 MIPP30301 263 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 TUSC3Q13454 348 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 PTK6Q13882 451 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 TSNAXIP1Q2TAA8 658 aa14.34□□□□□ -0.11
RNF43-202ENST00000577625 SMTNL2Q2TAL5 461 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms