RNA–Protein interactions for RNA: ENST00000577524.5

ARHGAP28-208, Transcript of Rho GTPase activating protein 28, human

TSL 5

Gene ARHGAP28, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP28-208	ENST00000577524	PMS1	P54277	932 aa	Known RBP	5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	RAD23B	P54727	409 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	MFAP3	P55082	362 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	YWHAG	P61981	247 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	FOXK2	Q01167	660 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	EFEMP1	Q12805	493 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	KCNH2	Q12809	1159 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	BYSL	Q13895	437 aa	Known RBP	5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	MORC3	Q14149	939 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	GAS6	Q14393	721 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	HSF5	Q4G112	596 aa	Predicted RBP	5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	GRAMD4	Q6IC98	578 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	KLHDC10	Q6PID8	442 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	RHBDF2	Q6PJF5	856 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	FOXR2	Q6PJQ5	311 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	TPGS1	Q6ZTW0	290 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	SYT13	Q7L8C5	426 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	CCDC186	Q7Z3E2	898 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	PIGZ	Q86VD9	579 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	CCDC117	Q8IWD4	279 aa	Predicted RBP	5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	BBS7	Q8IWZ6	715 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	ZC3H3	Q8IXZ2	948 aa	Known RBP	5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	DCLK2	Q8N568	766 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	CCDC33	Q8N5R6	958 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	NAT16	Q8N8M0	369 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	C12orf50	Q8NA57	414 aa	Predicted RBP	5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	MLKL	Q8NB16	471 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	SUMF1	Q8NBK3	374 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	SLC4A11	Q8NBS3	891 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	WHAMM	Q8TF30	809 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	UCMA	Q8WVF2	138 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	GAB3	Q8WWW8	586 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	SPACA7	Q96KW9	195 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	GBP4	Q96PP9	640 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	HHIP	Q96QV1	700 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	BBS2	Q9BXC9	721 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	CYLD	Q9NQC7	956 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	SPHK2	Q9NRA0	654 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	TMEM30A	Q9NV96	361 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	DNAJC17	Q9NVM6	304 aa	Known RBP	5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	CLIC5	Q9NZA1	410 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	IL37	Q9NZH6	218 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	KIAA1468	Q9P260	1216 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	RWDD2A	Q9UIY3	292 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	NUDT5	Q9UKK9	219 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	TSPAN16	Q9UKR8	245 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	CDV3	Q9UKY7	258 aa	Known RBP	5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	COQ4	Q9Y3A0	265 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	DOCK6	Q96HP0	2047 aa		5.69	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	PIEZO1	Q92508	2521 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	TYW5	A2RUC4	315 aa	Known RBP	5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524		K7ESF4	209 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524		M0QYV0	167 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	CAPN9	O14815	690 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	XPO1	O14980	1071 aa	Known RBP	5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	PMM2	O15305	246 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	HOXC11	O43248	304 aa	Predicted RBP	5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	SART1	O43290	800 aa	Known RBP	5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	LRP3	O75074	770 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	FBXO21	O94952	628 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	KLF8	O95600	359 aa	Predicted RBP	5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	TBX18	O95935	607 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	LCP1	P13796	627 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	OPRD1	P41143	372 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	SLC6A11	P48066	632 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	DGKG	P49619	791 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	SNX16	P57768	344 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	PDE4C	Q08493	712 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	SPEM2	Q0P670	501 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	PUM1	Q14671	1186 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	AASDH	Q4L235	1098 aa	Predicted RBP	5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	C10orf76	Q5T2E6	689 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	ANO7	Q6IWH7	933 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	TTI2	Q6NXR4	508 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	GBP6	Q6ZN66	633 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	HTR3D	Q70Z44	454 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	RRAGA	Q7L523	313 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	ENOSF1	Q7L5Y1	443 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	GPRIN1	Q7Z2K8	1008 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	DGLUCY	Q7Z3D6	616 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	PARP9	Q8IXQ6	854 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	ZNF513	Q8N8E2	541 aa	Predicted RBP	5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	TXNDC5	Q8NBS9	432 aa	Known RBP	5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	RBBP8NL	Q8NC74	664 aa	Predicted RBP	5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	EHBP1	Q8NDI1	1231 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	RIN3	Q8TB24	985 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	UBA3	Q8TBC4	463 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	USP33	Q8TEY7	942 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	DDI1	Q8WTU0	396 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	NELL1	Q92832	810 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	LOXL4	Q96JB6	756 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	ARID3A	Q99856	593 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	DUSP9	Q99956	384 aa	Known RBP	5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	TRIM62	Q9BVG3	475 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	KLF16	Q9BXK1	252 aa	Predicted RBP	5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	ULBP1	Q9BZM6	244 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	NUP62CL	Q9H1M0	184 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	PDCL3	Q9H2J4	239 aa		5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	FBRSL1	Q9HCM7	1045 aa	Known RBP	5.68	□□□□□ -1.5
ARHGAP28-208	ENST00000577524	UBE2T	Q9NPD8	197 aa	Predicted RBP	5.68	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms