RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 SLC13A5Q86YT5 568 aaPredicted RBP12.98□□□□□ -0.33
TSEN54-204ENST00000577197 SCN4BQ8IWT1 228 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 GPR161Q8N6U8 529 aaKnown RBP12.98□□□□□ -0.33
TSEN54-204ENST00000577197 GDPD5Q8WTR4 605 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 CLEC4CQ8WTT0 213 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 UBXN4Q92575 508 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 MRPL38Q96DV4 380 aaKnown RBP12.98□□□□□ -0.33
TSEN54-204ENST00000577197 CFAP57Q96MR6 1250 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 SLITRK1Q96PX8 696 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 ZNF670Q9BS34 389 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 EMILIN2Q9BXX0 1053 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 RHOBTB2Q9BYZ6 727 aa12.98□□□□□ -0.33
TSEN54-204ENST00000577197 TTYH1Q9H313 450 aaPredicted RBP12.98□□□□□ -0.33
TSEN54-204ENST00000577197 UXTQ9UBK9 157 aaPredicted RBP12.98□□□□□ -0.33
TSEN54-204ENST00000577197 ZNF638Q14966 1978 aaKnown RBP12.98□□□□□ -0.33
TSEN54-204ENST00000577197 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.97□□□□□ -0.33
TSEN54-204ENST00000577197 C2orf71A6NGG8 1288 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 C2CD2LO14523 706 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 TJP3O95049 919 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 SLC2A3P11169 496 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 PFKLP17858 780 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 MCM3P25205 808 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 FNTAP49354 379 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 SULT1E1P49888 294 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 ARSEP51690 589 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 KPNA1P52294 538 aaPredicted RBP12.97□□□□□ -0.33
TSEN54-204ENST00000577197 RNASE9P60153 205 aaKnown RBP12.97□□□□□ -0.33
TSEN54-204ENST00000577197 DUSP4Q13115 394 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 KLF1Q13351 362 aaPredicted RBP12.97□□□□□ -0.33
TSEN54-204ENST00000577197 VEPH1Q14D04 833 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 TAF5Q15542 800 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 ARL13BQ3SXY8 428 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 MGAT5BQ3V5L5 792 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 ODF2Q5BJF6 829 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 ERMARDQ5T6L9 678 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 PLPP4Q5VZY2 271 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 CYP4V2Q6ZWL3 525 aaPredicted RBP12.97□□□□□ -0.33
TSEN54-204ENST00000577197 SND1Q7KZF4 910 aaKnown RBP eCLIP12.97□□□□□ -0.33
TSEN54-204ENST00000577197 ITIH5Q86UX2 942 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 TTC13Q8NBP0 860 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 SLCO2A1Q92959 643 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 PPP2R3CQ969Q6 453 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 FAF2Q96CS3 445 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 LRCH3Q96II8 777 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 CAPZA3Q96KX2 299 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 SERPINB11Q96P15 392 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 PSMB7Q99436 277 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 OSBPL8Q9BZF1 889 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 TLR8Q9NR97 1041 aaKnown RBP12.97□□□□□ -0.33
TSEN54-204ENST00000577197 DPP7Q9UHL4 492 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 FEZ2Q9UHY8 353 aaPredicted RBP12.97□□□□□ -0.33
TSEN54-204ENST00000577197 USTQ9Y2C2 406 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 MYO16Q9Y6X6 1858 aa12.97□□□□□ -0.33
TSEN54-204ENST00000577197 RANBP2P49792 3224 aaKnown RBP12.96□□□□□ -0.33
TSEN54-204ENST00000577197 C3orf70A6NLC5 250 aaPredicted RBP12.96□□□□□ -0.33
TSEN54-204ENST00000577197 SOBPA7XYQ1 873 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 RFXAPO00287 272 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 PIK3R2O00459 728 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 KRIT1O00522 736 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 TEX28O15482 410 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 GRAP2O75791 330 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 PAPLNO95428 1278 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 KRT1P04264 644 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 CNPP09543 421 aaKnown RBP12.96□□□□□ -0.33
TSEN54-204ENST00000577197 RARAP10276 462 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 RALAP11233 206 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 NCAM1P13591 858 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 ATF6P18850 670 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 POU3F3P20264 500 aaPredicted RBP12.96□□□□□ -0.33
TSEN54-204ENST00000577197 KDELR1P24390 212 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 IL1R2P27930 398 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 HOXA9P31269 272 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 CHRNA3P32297 505 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 ELF1P32519 619 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 CA8P35219 290 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 IRS1P35568 1242 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 CDKN2BP42772 138 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 ALDH1A3P47895 512 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 HCAR3P49019 387 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 CXCR3P49682 368 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 RING1Q06587 406 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 TFDP2Q14188 446 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 PPP2R5DQ14738 602 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 GRIN2CQ14957 1233 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 DDR2Q16832 855 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 LONRF2Q1L5Z9 754 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 C15orf59Q2T9L4 293 aaPredicted RBP12.96□□□□□ -0.33
TSEN54-204ENST00000577197 OTUD1Q5VV17 481 aaPredicted RBP12.96□□□□□ -0.33
TSEN54-204ENST00000577197 BTBD8Q5XKL5 378 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 LILRA6Q6PI73 481 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 SPOCD1Q6ZMY3 1216 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 EIF1ADQ8N9N8 165 aaKnown RBP12.96□□□□□ -0.33
TSEN54-204ENST00000577197 SCAMP5Q8TAC9 235 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 AUTS2Q8WXX7 1259 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 KLHL5Q96PQ7 755 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 PRDM12Q9H4Q4 367 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 LRRC19Q9H756 370 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 WDR6Q9NNW5 1121 aaKnown RBP12.96□□□□□ -0.33
TSEN54-204ENST00000577197 FBXW11Q9UKB1 542 aa12.96□□□□□ -0.33
TSEN54-204ENST00000577197 YIPF1Q9Y548 306 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms