RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 GRAMD4Q6IC98 578 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 TRMT11Q7Z4G4 463 aaKnown RBP16.27■□□□□ 0.2
SF3B3-215ENST00000577085 ALLCQ8N6M5 410 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 RBBP8NLQ8NC74 664 aaPredicted RBP16.27■□□□□ 0.2
SF3B3-215ENST00000577085 GOLGA1Q92805 767 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 WBP2Q969T9 261 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 ULBP1Q9BZM6 244 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 DCLK3Q9C098 648 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 INTS2Q9H0H0 1204 aaKnown RBP16.27■□□□□ 0.2
SF3B3-215ENST00000577085 OLA1Q9NTK5 396 aaKnown RBP16.27■□□□□ 0.2
SF3B3-215ENST00000577085 DNAJC17Q9NVM6 304 aaKnown RBP16.27■□□□□ 0.2
SF3B3-215ENST00000577085 MMP17Q9ULZ9 603 aa16.27■□□□□ 0.2
SF3B3-215ENST00000577085 SLC12A8A0AV02 714 aa16.26■□□□□ 0.19
SF3B3-215ENST00000577085 TULP2O00295 520 aa16.26■□□□□ 0.19
SF3B3-215ENST00000577085 STC2O76061 302 aa16.26■□□□□ 0.19
SF3B3-215ENST00000577085 TYRP14679 529 aa16.26■□□□□ 0.19
SF3B3-215ENST00000577085 SDHBP21912 280 aa16.26■□□□□ 0.19
SF3B3-215ENST00000577085 CHKAP35790 457 aa16.26■□□□□ 0.19
SF3B3-215ENST00000577085 USP39Q53GS9 565 aaKnown RBP16.26■□□□□ 0.19
SF3B3-215ENST00000577085 C10orf76Q5T2E6 689 aa16.26■□□□□ 0.19
SF3B3-215ENST00000577085 ANO7Q6IWH7 933 aa16.26■□□□□ 0.19
SF3B3-215ENST00000577085 LCLAT1Q6UWP7 414 aa16.26■□□□□ 0.19
SF3B3-215ENST00000577085 FAM160A2Q8N612 972 aaPredicted RBP16.26■□□□□ 0.19
SF3B3-215ENST00000577085 TXNDC5Q8NBS9 432 aaKnown RBP16.26■□□□□ 0.19
SF3B3-215ENST00000577085 BHMTQ93088 406 aa16.26■□□□□ 0.19
SF3B3-215ENST00000577085 CNOT6LQ96LI5 555 aaKnown RBP16.26■□□□□ 0.19
SF3B3-215ENST00000577085 POLMQ9NP87 494 aaPredicted RBP16.26■□□□□ 0.19
SF3B3-215ENST00000577085 BCCIPQ9P287 314 aaKnown RBP eCLIP16.26■□□□□ 0.19
SF3B3-215ENST00000577085 EBF1Q9UH73 591 aa16.26■□□□□ 0.19
SF3B3-215ENST00000577085 DACH1Q9UI36 760 aa16.26■□□□□ 0.19
SF3B3-215ENST00000577085 FRYLO94915 3013 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 PRR5-ARHGAP8B1AHC4 643 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 ZBTB24O43167 697 aaPredicted RBP16.25■□□□□ 0.19
SF3B3-215ENST00000577085 LRP3O75074 770 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 CYBBP04839 570 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 CORO1AP31146 461 aaKnown RBP16.25■□□□□ 0.19
SF3B3-215ENST00000577085 GBP1P32455 592 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 MTIF2P46199 727 aaKnown RBP16.25■□□□□ 0.19
SF3B3-215ENST00000577085 ARHGAP8P85298 464 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 ELF2Q15723 593 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 CNGA2Q16280 664 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 CRY1Q16526 586 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 PM20D1Q6GTS8 502 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 SDE2Q6IQ49 451 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 ARHGEF19Q8IW93 802 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 ETFBKMTQ8IXQ9 262 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 UBR7Q8N806 425 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 ZNF513Q8N8E2 541 aaPredicted RBP16.25■□□□□ 0.19
SF3B3-215ENST00000577085 TERB1Q8NA31 727 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 LMO3Q8TAP4 145 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 KCNV2Q8TDN2 545 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 KCTD13Q8WZ19 329 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 KAT5Q92993 513 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 FAM81BQ96LP2 452 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 NUP62CLQ9H1M0 184 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 CLSTN2Q9H4D0 955 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 UBE2TQ9NPD8 197 aaPredicted RBP16.25■□□□□ 0.19
SF3B3-215ENST00000577085 CNGB3Q9NQW8 809 aa16.25■□□□□ 0.19
SF3B3-215ENST00000577085 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.25■□□□□ 0.19
SF3B3-215ENST00000577085 PTPRZ1P23471 2315 aaPredicted RBP16.24■□□□□ 0.19
SF3B3-215ENST00000577085 A0A0A0MRY4 1105 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 MED7O43513 233 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 CACNG3O60359 315 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 FOXD2O60548 495 aaPredicted RBP16.24■□□□□ 0.19
SF3B3-215ENST00000577085 GREM1O60565 184 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 BRD2P25440 801 aaKnown RBP16.24■□□□□ 0.19
SF3B3-215ENST00000577085 HARS2P49590 506 aaKnown RBP16.24■□□□□ 0.19
SF3B3-215ENST00000577085 DGKGP49619 791 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 RGS7P49802 495 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 MFAP3P55082 362 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 EMC10Q5UCC4 262 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 BSPRYQ5W0U4 402 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 GBP6Q6ZN66 633 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 ENOSF1Q7L5Y1 443 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 KBTBD6Q86V97 674 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 C11orf74Q86VG3 221 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 DENND1CQ8IV53 801 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 FAM114A1Q8IWE2 563 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 SFTPA1Q8IWL2 248 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 PGBD3Q8N328 593 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 IL17RCQ8NAC3 791 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 TFAP2BQ92481 460 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 NDRG1Q92597 394 aaKnown RBP16.24■□□□□ 0.19
SF3B3-215ENST00000577085 PLD4Q96BZ4 506 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 TPSD1Q9BZJ3 242 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 ABCC13Q9NSE7 274 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 MARK1Q9P0L2 795 aa16.24■□□□□ 0.19
SF3B3-215ENST00000577085 CDV3Q9UKY7 258 aaKnown RBP16.24■□□□□ 0.19
SF3B3-215ENST00000577085 RNF225M0QZC1 329 aaPredicted RBP16.23■□□□□ 0.19
SF3B3-215ENST00000577085 PIK3R2O00459 728 aa16.23■□□□□ 0.19
SF3B3-215ENST00000577085 RHOBTB1O94844 696 aa16.23■□□□□ 0.19
SF3B3-215ENST00000577085 USP8P40818 1118 aa16.23■□□□□ 0.19
SF3B3-215ENST00000577085 MESP2Q0VG99 397 aa16.23■□□□□ 0.19
SF3B3-215ENST00000577085 PUM1Q14671 1186 aaKnown RBP eCLIP16.23■□□□□ 0.19
SF3B3-215ENST00000577085 RSPO4Q2I0M5 234 aaPredicted RBP16.23■□□□□ 0.19
SF3B3-215ENST00000577085 Q6ZNB5 142 aa16.23■□□□□ 0.19
SF3B3-215ENST00000577085 FMNL3Q8IVF7 1028 aa16.23■□□□□ 0.19
SF3B3-215ENST00000577085 EDEM1Q92611 657 aa16.23■□□□□ 0.19
SF3B3-215ENST00000577085 RMDN1Q96DB5 314 aa16.23■□□□□ 0.19
SF3B3-215ENST00000577085 LOXL4Q96JB6 756 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms