RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 ZNF606Q8WXB4 792 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 SHC3Q92529 594 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 NKD2Q969F2 451 aaPredicted RBP15.98■□□□□ 0.15
SMG6-220ENST00000576218 NOX5Q96PH1 765 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 PHOX2BQ99453 314 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 ZSWIM1Q9BR11 485 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 DCLK3Q9C098 648 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 SYNCQ9H7C4 482 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 SPHK2Q9NRA0 654 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 ABCC13Q9NSE7 274 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 SLC8A2Q9UPR5 921 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 ZNF510Q9Y2H8 683 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 R4GN57 208 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 YJEFN3A6XGL0 299 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 E7ENQ6 273 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 NEDD8-MDP1E9PL57 170 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 CAPN9O14815 690 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 APODP05090 189 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 CORO1AP31146 461 aaKnown RBP15.97■□□□□ 0.15
SMG6-220ENST00000576218 NBL1P41271 181 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 BPIFB4P59827 614 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 SATB1Q01826 763 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 ZNF528Q3MIS6 628 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 RHBDF2Q6PJF5 856 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 HTR3DQ70Z44 454 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 PASD1Q8IV76 773 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 NAT16Q8N8M0 369 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 IRGQQ8WZA9 623 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 ACDQ96AP0 544 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 XPO6Q96QU8 1125 aaKnown RBP15.97■□□□□ 0.15
SMG6-220ENST00000576218 PNKPQ96T60 521 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 TRIM62Q9BVG3 475 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 BBS2Q9BXC9 721 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 SIX2Q9NPC8 291 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 ACP6Q9NPH0 428 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 PRMT8Q9NR22 394 aaPredicted RBP15.97■□□□□ 0.15
SMG6-220ENST00000576218 ARHGEF4Q9NR80 690 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 FHOD1Q9Y613 1164 aa15.97■□□□□ 0.15
SMG6-220ENST00000576218 BECN2A8MW95 431 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 STC2O76061 302 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 LTFP02788 710 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 CYBBP04839 570 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 GPD2P43304 727 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 HARS2P49590 506 aaKnown RBP15.96■□□□□ 0.15
SMG6-220ENST00000576218 SNX16P57768 344 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 DRAP1Q14919 205 aaPredicted RBP15.96■□□□□ 0.15
SMG6-220ENST00000576218 MEA1Q16626 185 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 KLHDC7AQ5VTJ3 777 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 FMNL3Q8IVF7 1028 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 ZNF276Q8N554 614 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 RPLP0P6Q8NHW5 317 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 IPO4Q8TEX9 1081 aaKnown RBP15.96■□□□□ 0.15
SMG6-220ENST00000576218 BHMTQ93088 406 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 WBP2Q969T9 261 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 PLD4Q96BZ4 506 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 HINFPQ9BQA5 517 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 FAM126AQ9BYI3 521 aaPredicted RBP15.96■□□□□ 0.15
SMG6-220ENST00000576218 ZSCAN32Q9NX65 697 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 WDR35Q9P2L0 1181 aa15.96■□□□□ 0.15
SMG6-220ENST00000576218 TBC1D3BA6NDS4 549 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 SMTNL1A8MU46 457 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 FOXN3O00409 490 aaPredicted RBP15.95■□□□□ 0.14
SMG6-220ENST00000576218 GFRA3O60609 400 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 PNMA6AP0CW24 399 aaPredicted RBP15.95■□□□□ 0.14
SMG6-220ENST00000576218 NCAM1P13591 858 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 UCHL3P15374 230 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 CHKAP35790 457 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 OPRD1P41143 372 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 EIF2DP41214 584 aaKnown RBP15.95■□□□□ 0.14
SMG6-220ENST00000576218 SLC6A11P48066 632 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 COPB1P53618 953 aaKnown RBP15.95■□□□□ 0.14
SMG6-220ENST00000576218 HEATR6Q6AI08 1181 aaKnown RBP15.95■□□□□ 0.14
SMG6-220ENST00000576218 TMEM25Q86YD3 366 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 DENND1CQ8IV53 801 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 SCUBE3Q8IX30 993 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 MAML2Q8IZL2 1156 aaPredicted RBP15.95■□□□□ 0.14
SMG6-220ENST00000576218 SCML4Q8N228 414 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 CLEC4CQ8WTT0 213 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 SPAG5Q96R06 1193 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 FBRSL1Q9HCM7 1045 aaKnown RBP15.95■□□□□ 0.14
SMG6-220ENST00000576218 FAM207AQ9NSI2 230 aaPredicted RBP15.95■□□□□ 0.14
SMG6-220ENST00000576218 DNAJC17Q9NVM6 304 aaKnown RBP15.95■□□□□ 0.14
SMG6-220ENST00000576218 DEC1Q9P2X7 70 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 SFMBT1Q9UHJ3 866 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 AJAP1Q9UKB5 411 aaPredicted RBP15.95■□□□□ 0.14
SMG6-220ENST00000576218 PCDHGA2Q9Y5H1 932 aa15.95■□□□□ 0.14
SMG6-220ENST00000576218 CACNA1IQ9P0X4 2223 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 E5RJQ4 531 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 HOXC11O43248 304 aaPredicted RBP15.94■□□□□ 0.14
SMG6-220ENST00000576218 MSI1O43347 362 aaKnown RBP15.94■□□□□ 0.14
SMG6-220ENST00000576218 KAT7O95251 611 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 TYRP14679 529 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 GRIA2P42262 883 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 TPM4P67936 248 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 UBXN1Q04323 297 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 KCNMA1Q12791 1236 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 PDCLQ13371 301 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 GAS6Q14393 721 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 KLHL40Q2TBA0 621 aa15.94■□□□□ 0.14
SMG6-220ENST00000576218 C2orf27AQ580R0 203 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms