RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 IL9P15248 144 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 GPC5P78333 572 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 MTF1Q14872 753 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 DNAAF5Q86Y56 855 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 ARL14EPQ8N8R7 260 aaPredicted RBP17.86■□□□□ 0.45
NUP88-210ENST00000574867 SMARCD2Q92925 531 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 SMOC2Q9H3U7 446 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 KIF9Q9HAQ2 790 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 PRKAG3Q9UGI9 489 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 STAP1Q9ULZ2 295 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 ATMINO43313 823 aaPredicted RBP17.86■□□□□ 0.45
NUP88-210ENST00000574867 MBL2P11226 248 aaPredicted RBP17.86■□□□□ 0.45
NUP88-210ENST00000574867 NOS2P35228 1153 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 MATKP42679 507 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 MAMLD1Q13495 774 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 PPP1R15BQ5SWA1 713 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 DEFB106AQ8N104 65 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 PLCD3Q8N3E9 789 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 ZSWIM3Q96MP5 696 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 ASB16Q96NS5 453 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 SLC22A12Q96S37 553 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 TRPV4Q9HBA0 871 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.86■□□□□ 0.45
NUP88-210ENST00000574867 ARHGAP26Q9UNA1 814 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 NAALADL1Q9UQQ1 740 aa17.86■□□□□ 0.45
NUP88-210ENST00000574867 PRUNE2Q8WUY3 3088 aa17.85■□□□□ 0.45
NUP88-210ENST00000574867 CYP1A2P05177 515 aa17.85■□□□□ 0.45
NUP88-210ENST00000574867 KCNQ1P51787 676 aa17.85■□□□□ 0.45
NUP88-210ENST00000574867 RNASE9P60153 205 aaKnown RBP17.85■□□□□ 0.45
NUP88-210ENST00000574867 DCAF6Q58WW2 860 aa17.85■□□□□ 0.45
NUP88-210ENST00000574867 MTSS1LQ765P7 747 aa17.85■□□□□ 0.45
NUP88-210ENST00000574867 PHLDB2Q86SQ0 1253 aa17.85■□□□□ 0.45
NUP88-210ENST00000574867 DDX42Q86XP3 938 aaKnown RBP eCLIP17.85■□□□□ 0.45
NUP88-210ENST00000574867 PACSIN1Q9BY11 444 aa17.85■□□□□ 0.45
NUP88-210ENST00000574867 RNF38Q9H0F5 515 aa17.85■□□□□ 0.45
NUP88-210ENST00000574867 MARCH2Q9P0N8 246 aa17.85■□□□□ 0.45
NUP88-210ENST00000574867 FLT3P36888 993 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 MAGEA1P43355 309 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 KRT83P78385 493 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 CCZ1BP86790 482 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 CCZ1P86791 482 aaPredicted RBP17.84■□□□□ 0.45
NUP88-210ENST00000574867 EFEMP1Q12805 493 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 FAM78AQ5JUQ0 283 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 DCUN1D2Q6PH85 259 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 ARID3BQ8IVW6 561 aaPredicted RBP17.84■□□□□ 0.45
NUP88-210ENST00000574867 TXLNBQ8N3L3 684 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 DQX1Q8TE96 717 aaKnown RBP17.84■□□□□ 0.45
NUP88-210ENST00000574867 E2F7Q96AV8 911 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 SERPINB11Q96P15 392 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 MCEEQ96PE7 176 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 CYP2S1Q96SQ9 504 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 DDX23Q9BUQ8 820 aaKnown RBP17.84■□□□□ 0.45
NUP88-210ENST00000574867 TDP1Q9NUW8 608 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 TMEM51Q9NW97 253 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 MYO1AQ9UBC5 1043 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 RASAL2Q9UJF2 1139 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 NUDT5Q9UKK9 219 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 PCDHA13Q9Y5I0 950 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 SPTBN5Q9NRC6 3674 aaKnown RBP17.84■□□□□ 0.45
NUP88-210ENST00000574867 C2CD4DB7Z1M9 353 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 TBX18O95935 607 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 TCF3P15923 654 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 KPNA1P52294 538 aaPredicted RBP17.84■□□□□ 0.45
NUP88-210ENST00000574867 NNTQ13423 1086 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 SYPL2Q5VXT5 272 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 POTEHQ6S545 545 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 ZDHHC14Q8IZN3 488 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 ASB2Q96Q27 587 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 OBP2AQ9NY56 170 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 CPQQ9Y646 472 aa17.84■□□□□ 0.45
NUP88-210ENST00000574867 C2CD4BA6NLJ0 364 aa17.83■□□□□ 0.45
NUP88-210ENST00000574867 PRAMEF12O95522 483 aa17.83■□□□□ 0.45
NUP88-210ENST00000574867 DESP17661 470 aa17.83■□□□□ 0.45
NUP88-210ENST00000574867 SP100P23497 879 aaPredicted RBP17.83■□□□□ 0.45
NUP88-210ENST00000574867 SDC4P31431 198 aa17.83■□□□□ 0.45
NUP88-210ENST00000574867 RFC1P35251 1148 aaPredicted RBP17.83■□□□□ 0.45
NUP88-210ENST00000574867 COG7P83436 770 aa17.83■□□□□ 0.45
NUP88-210ENST00000574867 MIB1Q86YT6 1006 aa17.83■□□□□ 0.45
NUP88-210ENST00000574867 ADHFE1Q8IWW8 467 aa17.83■□□□□ 0.45
NUP88-210ENST00000574867 CELF5Q8N6W0 485 aaKnown RBP17.83■□□□□ 0.45
NUP88-210ENST00000574867 EMC1Q8N766 993 aa17.83■□□□□ 0.45
NUP88-210ENST00000574867 JOSD2Q8TAC2 188 aa17.83■□□□□ 0.45
NUP88-210ENST00000574867 USP13Q92995 863 aaPredicted RBP17.83■□□□□ 0.45
NUP88-210ENST00000574867 NT5C3BQ969T7 300 aa17.83■□□□□ 0.45
NUP88-210ENST00000574867 RPGRIP1Q96KN7 1286 aa17.83■□□□□ 0.45
NUP88-210ENST00000574867 UVRAGQ9P2Y5 699 aa17.83■□□□□ 0.45
NUP88-210ENST00000574867 HBS1LQ9Y450 684 aaKnown RBP17.83■□□□□ 0.45
NUP88-210ENST00000574867 COL6A3P12111 3177 aa17.83■□□□□ 0.44
NUP88-210ENST00000574867 MDM4O15151 490 aa17.83■□□□□ 0.44
NUP88-210ENST00000574867 IGLV3-25P01717 112 aa17.83■□□□□ 0.44
NUP88-210ENST00000574867 GPD1P21695 349 aa17.83■□□□□ 0.44
NUP88-210ENST00000574867 PTPN9P43378 593 aa17.83■□□□□ 0.44
NUP88-210ENST00000574867 SLC25A52Q3SY17 297 aa17.83■□□□□ 0.44
NUP88-210ENST00000574867 RHOT2Q8IXI1 618 aa17.83■□□□□ 0.44
NUP88-210ENST00000574867 FNIP1Q8TF40 1166 aa17.83■□□□□ 0.44
NUP88-210ENST00000574867 ARHGEF26Q96DR7 871 aa17.83■□□□□ 0.44
NUP88-210ENST00000574867 ZFRQ96KR1 1074 aaKnown RBP17.83■□□□□ 0.44
NUP88-210ENST00000574867 NPY6RQ99463 290 aa17.83■□□□□ 0.44
NUP88-210ENST00000574867 NUP85Q9BW27 656 aa17.83■□□□□ 0.44
NUP88-210ENST00000574867 FAM204AQ9H8W3 233 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms