RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 QARSP47897 775 aaKnown RBP14.91□□□□□ -0.02
SMG6-215ENST00000574501 SLC1A6P48664 564 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 IDH3AP50213 366 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 MTTPP55157 894 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 APOFQ13790 326 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 NPNTQ6UXI9 565 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 RFX6Q8HWS3 928 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 ADGRF2Q8IZF7 708 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 ZNF606Q8WXB4 792 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 BSNDQ8WZ55 320 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 FAF2Q96CS3 445 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 CMTM5Q96DZ9 223 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 MAML3Q96JK9 1138 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 PFDN4Q9NQP4 134 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 KMT5AQ9NQR1 393 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 KCNH7Q9NS40 1196 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 PLK2Q9NYY3 685 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 ZC3H7BQ9UGR2 993 aaKnown RBP14.91□□□□□ -0.02
SMG6-215ENST00000574501 PTPRJQ12913 1337 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 HMX2A2RU54 273 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 NELFEP18615 380 aaKnown RBP14.91□□□□□ -0.02
SMG6-215ENST00000574501 ALDH1B1P30837 517 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 CD97P48960 835 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 NR1H2P55055 460 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 MCCD1P59942 119 aaPredicted RBP14.91□□□□□ -0.02
SMG6-215ENST00000574501 ZNF394Q53GI3 561 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 XKR9Q5GH70 373 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 PPP6R3Q5H9R7 873 aaPredicted RBP14.91□□□□□ -0.02
SMG6-215ENST00000574501 RARS2Q5T160 578 aaKnown RBP14.91□□□□□ -0.02
SMG6-215ENST00000574501 TEDDM1Q5T9Z0 273 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 APOBEC3HQ6NTF7 200 aaKnown RBP14.91□□□□□ -0.02
SMG6-215ENST00000574501 C15orf39Q6ZRI6 1047 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 PTF1AQ7RTS3 328 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 LRRC43Q8N309 656 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 SMYD1Q8NB12 490 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 NLRP4Q96MN2 994 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 MAN1C1Q9NR34 630 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 C6orf203Q9P0P8 240 aaPredicted RBP14.91□□□□□ -0.02
SMG6-215ENST00000574501 SLC9A2Q9UBY0 812 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 HERC5Q9UII4 1024 aaKnown RBP14.91□□□□□ -0.02
SMG6-215ENST00000574501 E9PBE3 544 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 CSDE1O75534 798 aaKnown RBP14.9□□□□□ -0.02
SMG6-215ENST00000574501 VNN1O95497 513 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 OATP04181 439 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 YWHAZP63104 245 aaKnown RBP14.9□□□□□ -0.02
SMG6-215ENST00000574501 DMP1Q13316 513 aaPredicted RBP14.9□□□□□ -0.02
SMG6-215ENST00000574501 TAF5Q15542 800 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 LGSNQ5TDP6 509 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 BBS5Q8N3I7 341 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 GMCL1P1Q8NEA9 526 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 SPATA18Q8TC71 538 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 ARHGEF1Q92888 912 aaKnown RBP14.9□□□□□ -0.02
SMG6-215ENST00000574501 MXRA8Q9BRK3 442 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 PLAC1Q9HBJ0 212 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 FAIMQ9NVQ4 179 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 RSL24D1Q9UHA3 163 aaKnown RBP14.9□□□□□ -0.02
SMG6-215ENST00000574501 PCSK1NQ9UHG2 260 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 H0YIN7 160 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 XPO1O14980 1071 aaKnown RBP14.9□□□□□ -0.02
SMG6-215ENST00000574501 TBC1D12O60347 775 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 PDGFRBP09619 1106 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 TFPTP0C1Z6 253 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 KDELR1P24390 212 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 PSMA2P25787 234 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 CRHR1P34998 444 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 ACOT2P49753 483 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 CCR3P51677 355 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 PIGHQ14442 188 aaPredicted RBP14.9□□□□□ -0.02
SMG6-215ENST00000574501 ABCB5Q2M3G0 1257 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 TRMT10BQ6PF06 316 aaKnown RBP14.9□□□□□ -0.02
SMG6-215ENST00000574501 DARS2Q6PI48 645 aaKnown RBP14.9□□□□□ -0.02
SMG6-215ENST00000574501 BBS12Q6ZW61 710 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 ARFGAP1Q8N6T3 406 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 RAB3IL1Q8TBN0 382 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 GRIN3AQ8TCU5 1115 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 DDI1Q8WTU0 396 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 ZNF512Q96ME7 567 aaPredicted RBP14.9□□□□□ -0.02
SMG6-215ENST00000574501 RIT2Q99578 217 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 NRDE2Q9H7Z3 1164 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 RAB6BQ9NRW1 208 aa14.9□□□□□ -0.02
SMG6-215ENST00000574501 BARX2Q9UMQ3 279 aaPredicted RBP14.9□□□□□ -0.02
SMG6-215ENST00000574501 COL5A3P25940 1745 aaPredicted RBP14.89□□□□□ -0.03
SMG6-215ENST00000574501 BIRC5O15392 142 aa14.89□□□□□ -0.03
SMG6-215ENST00000574501 GSRP00390 522 aa14.89□□□□□ -0.03
SMG6-215ENST00000574501 ENTPD1P49961 510 aa14.89□□□□□ -0.03
SMG6-215ENST00000574501 STAT2P52630 851 aa14.89□□□□□ -0.03
SMG6-215ENST00000574501 NAA20P61599 178 aa14.89□□□□□ -0.03
SMG6-215ENST00000574501 KCNJ11Q14654 390 aa14.89□□□□□ -0.03
SMG6-215ENST00000574501 C16orf72Q14CZ0 275 aa14.89□□□□□ -0.03
SMG6-215ENST00000574501 ZACNQ401N2 412 aa14.89□□□□□ -0.03
SMG6-215ENST00000574501 MBLAC2Q68D91 279 aa14.89□□□□□ -0.03
SMG6-215ENST00000574501 NCCRP1Q6ZVX7 275 aaPredicted RBP14.89□□□□□ -0.03
SMG6-215ENST00000574501 ANKRD23Q86SG2 305 aa14.89□□□□□ -0.03
SMG6-215ENST00000574501 LILRA2Q8N149 483 aa14.89□□□□□ -0.03
SMG6-215ENST00000574501 LRRN4Q8WUT4 740 aa14.89□□□□□ -0.03
SMG6-215ENST00000574501 SLC35B4Q969S0 331 aa14.89□□□□□ -0.03
SMG6-215ENST00000574501 TCRBV5S1A1TA0A578 114 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 MCF2LO15068 1137 aa14.88□□□□□ -0.03
SMG6-215ENST00000574501 DHX15O43143 795 aaKnown RBP14.88□□□□□ -0.03
SMG6-215ENST00000574501 SPAG6O75602 509 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms