RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 CDK5RAP1Q96SZ6 601 aaKnown RBP27.35■■□□□ 1.97
NPLOC4-215ENST00000574095 LRRC4Q9HBW1 653 aa27.35■■□□□ 1.97
NPLOC4-215ENST00000574095 DEC1Q9P2X7 70 aa27.35■■□□□ 1.97
NPLOC4-215ENST00000574095 MMP17Q9ULZ9 603 aa27.35■■□□□ 1.97
NPLOC4-215ENST00000574095 TBC1D3BA6NDS4 549 aa27.34■■□□□ 1.97
NPLOC4-215ENST00000574095 STC2O76061 302 aa27.34■■□□□ 1.97
NPLOC4-215ENST00000574095 KLF8O95600 359 aaPredicted RBP27.34■■□□□ 1.97
NPLOC4-215ENST00000574095 ZBED1O96006 694 aa27.34■■□□□ 1.97
NPLOC4-215ENST00000574095 CALCAP01258 141 aa27.34■■□□□ 1.97
NPLOC4-215ENST00000574095 AFPP02771 609 aaKnown RBP27.34■■□□□ 1.97
NPLOC4-215ENST00000574095 HMBSP08397 361 aa27.34■■□□□ 1.97
NPLOC4-215ENST00000574095 TNFRSF4P43489 277 aa27.34■■□□□ 1.97
NPLOC4-215ENST00000574095 DGKEP52429 567 aa27.34■■□□□ 1.97
NPLOC4-215ENST00000574095 PM20D1Q6GTS8 502 aa27.34■■□□□ 1.97
NPLOC4-215ENST00000574095 CACNA2D4Q7Z3S7 1137 aa27.34■■□□□ 1.97
NPLOC4-215ENST00000574095 KBTBD6Q86V97 674 aa27.34■■□□□ 1.97
NPLOC4-215ENST00000574095 IL17RCQ8NAC3 791 aa27.34■■□□□ 1.97
NPLOC4-215ENST00000574095 TXNDC5Q8NBS9 432 aaKnown RBP27.34■■□□□ 1.97
NPLOC4-215ENST00000574095 BBS2Q9BXC9 721 aa27.34■■□□□ 1.97
NPLOC4-215ENST00000574095 EBF1Q9UH73 591 aa27.34■■□□□ 1.97
NPLOC4-215ENST00000574095 NEDD8-MDP1E9PL57 170 aa27.33■■□□□ 1.97
NPLOC4-215ENST00000574095 PAEPP09466 180 aa27.33■■□□□ 1.97
NPLOC4-215ENST00000574095 CHRM1P11229 460 aaPredicted RBP27.33■■□□□ 1.97
NPLOC4-215ENST00000574095 KIR2DL1P43626 348 aaPredicted RBP27.33■■□□□ 1.97
NPLOC4-215ENST00000574095 CRY1Q16526 586 aa27.33■■□□□ 1.97
NPLOC4-215ENST00000574095 RSPO4Q2I0M5 234 aaPredicted RBP27.33■■□□□ 1.97
NPLOC4-215ENST00000574095 TMEM92Q6UXU6 159 aa27.33■■□□□ 1.97
NPLOC4-215ENST00000574095 Q6ZNB5 142 aa27.33■■□□□ 1.97
NPLOC4-215ENST00000574095 CREBRFQ8IUR6 639 aa27.33■■□□□ 1.97
NPLOC4-215ENST00000574095 ZSWIM1Q9BR11 485 aa27.33■■□□□ 1.97
NPLOC4-215ENST00000574095 RWDD2AQ9UIY3 292 aa27.33■■□□□ 1.97
NPLOC4-215ENST00000574095 SPAG17Q6Q759 2223 aa27.33■■□□□ 1.97
NPLOC4-215ENST00000574095 MYO18AQ92614 2054 aaKnown RBP27.32■■□□□ 1.96
NPLOC4-215ENST00000574095 SDK1Q7Z5N4 2213 aa27.32■■□□□ 1.96
NPLOC4-215ENST00000574095 SGK1O00141 431 aa27.32■■□□□ 1.96
NPLOC4-215ENST00000574095 FGFR1OPO95684 399 aaKnown RBP27.32■■□□□ 1.96
NPLOC4-215ENST00000574095 KLKB1P03952 638 aa27.32■■□□□ 1.96
NPLOC4-215ENST00000574095 TYRP14679 529 aa27.32■■□□□ 1.96
NPLOC4-215ENST00000574095 HNRNPLP14866 589 aaKnown RBP eCLIP27.32■■□□□ 1.96
NPLOC4-215ENST00000574095 COG7P83436 770 aa27.32■■□□□ 1.96
NPLOC4-215ENST00000574095 ADIGQ0VDE8 80 aa27.32■■□□□ 1.96
NPLOC4-215ENST00000574095 PKDCCQ504Y2 493 aa27.32■■□□□ 1.96
NPLOC4-215ENST00000574095 LCLAT1Q6UWP7 414 aa27.32■■□□□ 1.96
NPLOC4-215ENST00000574095 RSRC2Q7L4I2 434 aaKnown RBP27.32■■□□□ 1.96
NPLOC4-215ENST00000574095 BHLHA9Q7RTU4 235 aa27.32■■□□□ 1.96
NPLOC4-215ENST00000574095 XPO6Q96QU8 1125 aaKnown RBP27.32■■□□□ 1.96
NPLOC4-215ENST00000574095 WDR35Q9P2L0 1181 aa27.32■■□□□ 1.96
NPLOC4-215ENST00000574095 DCLK1O15075 740 aa27.31■■□□□ 1.96
NPLOC4-215ENST00000574095 SETSIPP0DME0 302 aa27.31■■□□□ 1.96
NPLOC4-215ENST00000574095 PREPLQ4J6C6 727 aaPredicted RBP27.31■■□□□ 1.96
NPLOC4-215ENST00000574095 ANO7Q6IWH7 933 aa27.31■■□□□ 1.96
NPLOC4-215ENST00000574095 TERB1Q8NA31 727 aa27.31■■□□□ 1.96
NPLOC4-215ENST00000574095 RBBP8NLQ8NC74 664 aaPredicted RBP27.31■■□□□ 1.96
NPLOC4-215ENST00000574095 BHMTQ93088 406 aa27.31■■□□□ 1.96
NPLOC4-215ENST00000574095 IPO9Q96P70 1041 aaKnown RBP27.31■■□□□ 1.96
NPLOC4-215ENST00000574095 MED15Q96RN5 788 aa27.31■■□□□ 1.96
NPLOC4-215ENST00000574095 TPSD1Q9BZJ3 242 aa27.31■■□□□ 1.96
NPLOC4-215ENST00000574095 INTS2Q9H0H0 1204 aaKnown RBP27.31■■□□□ 1.96
NPLOC4-215ENST00000574095 SEMA4GQ9NTN9 838 aa27.31■■□□□ 1.96
NPLOC4-215ENST00000574095 DNAJC17Q9NVM6 304 aaKnown RBP27.31■■□□□ 1.96
NPLOC4-215ENST00000574095 MARK1Q9P0L2 795 aa27.31■■□□□ 1.96
NPLOC4-215ENST00000574095 MARCH2Q9P0N8 246 aa27.31■■□□□ 1.96
NPLOC4-215ENST00000574095 INVSQ9Y283 1065 aa27.31■■□□□ 1.96
NPLOC4-215ENST00000574095 SLC12A8A0AV02 714 aa27.3■■□□□ 1.96
NPLOC4-215ENST00000574095 LCP1P13796 627 aa27.3■■□□□ 1.96
NPLOC4-215ENST00000574095 BRD2P25440 801 aaKnown RBP27.3■■□□□ 1.96
NPLOC4-215ENST00000574095 RGS7P49802 495 aa27.3■■□□□ 1.96
NPLOC4-215ENST00000574095 GCNT1Q02742 428 aa27.3■■□□□ 1.96
NPLOC4-215ENST00000574095 LMNB2Q03252 620 aa27.3■■□□□ 1.96
NPLOC4-215ENST00000574095 CNGA2Q16280 664 aa27.3■■□□□ 1.96
NPLOC4-215ENST00000574095 C10orf76Q5T2E6 689 aa27.3■■□□□ 1.96
NPLOC4-215ENST00000574095 GRAMD4Q6IC98 578 aa27.3■■□□□ 1.96
NPLOC4-215ENST00000574095 SIX6OS1Q8N1H7 587 aa27.3■■□□□ 1.96
NPLOC4-215ENST00000574095 KCTD13Q8WZ19 329 aa27.3■■□□□ 1.96
NPLOC4-215ENST00000574095 KREMEN1Q96MU8 473 aa27.3■■□□□ 1.96
NPLOC4-215ENST00000574095 PLK2Q9NYY3 685 aa27.3■■□□□ 1.96
NPLOC4-215ENST00000574095 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.3■■□□□ 1.96
NPLOC4-215ENST00000574095 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.3■■□□□ 1.96
NPLOC4-215ENST00000574095 PIK3R2O00459 728 aa27.29■■□□□ 1.96
NPLOC4-215ENST00000574095 CACNG3O60359 315 aa27.29■■□□□ 1.96
NPLOC4-215ENST00000574095 LRP3O75074 770 aa27.29■■□□□ 1.96
NPLOC4-215ENST00000574095 ADAM23O75077 832 aa27.29■■□□□ 1.96
NPLOC4-215ENST00000574095 CORO1AP31146 461 aaKnown RBP27.29■■□□□ 1.96
NPLOC4-215ENST00000574095 HSF5Q4G112 596 aaPredicted RBP27.29■■□□□ 1.96
NPLOC4-215ENST00000574095 EOGTQ5NDL2 527 aa27.29■■□□□ 1.96
NPLOC4-215ENST00000574095 NUDT18Q6ZVK8 323 aa27.29■■□□□ 1.96
NPLOC4-215ENST00000574095 RASSF3Q86WH2 238 aa27.29■■□□□ 1.96
NPLOC4-215ENST00000574095 SLC35F5Q8WV83 523 aa27.29■■□□□ 1.96
NPLOC4-215ENST00000574095 P2RY11Q96G91 374 aa27.29■■□□□ 1.96
NPLOC4-215ENST00000574095 CNOT6LQ96LI5 555 aaKnown RBP27.29■■□□□ 1.96
NPLOC4-215ENST00000574095 ARRDC1-AS1Q9H2J1 176 aa27.29■■□□□ 1.96
NPLOC4-215ENST00000574095 DLL3Q9NYJ7 618 aa27.29■■□□□ 1.96
NPLOC4-215ENST00000574095 STRIP2Q9ULQ0 834 aa27.29■■□□□ 1.96
NPLOC4-215ENST00000574095 ZNF510Q9Y2H8 683 aa27.29■■□□□ 1.96
NPLOC4-215ENST00000574095 YJEFN3A6XGL0 299 aa27.28■■□□□ 1.96
NPLOC4-215ENST00000574095 E7ENQ6 273 aa27.28■■□□□ 1.96
NPLOC4-215ENST00000574095 M0QYV0 167 aa27.28■■□□□ 1.96
NPLOC4-215ENST00000574095 GABBR2O75899 941 aa27.28■■□□□ 1.96
NPLOC4-215ENST00000574095 PUM1Q14671 1186 aaKnown RBP eCLIP27.28■■□□□ 1.96
NPLOC4-215ENST00000574095 CSRP2Q16527 193 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms