RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 KIAA1211LQ6NV74 962 aa23.19■■□□□ 1.3
SNF8-216ENST00000573795 Q6ZNB5 142 aa23.19■■□□□ 1.3
SNF8-216ENST00000573795 BBS2Q9BXC9 721 aa23.19■■□□□ 1.3
SNF8-216ENST00000573795 NUSAP1Q9BXS6 441 aaKnown RBP23.19■■□□□ 1.3
SNF8-216ENST00000573795 FSCN3Q9NQT6 498 aa23.19■■□□□ 1.3
SNF8-216ENST00000573795 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.19■■□□□ 1.3
SNF8-216ENST00000573795 NUDT5Q9UKK9 219 aa23.19■■□□□ 1.3
SNF8-216ENST00000573795 PCNX2A6NKB5 2137 aa23.18■■□□□ 1.3
SNF8-216ENST00000573795 IGHV1OR15-9A0A0B4J2B8 117 aa23.18■■□□□ 1.3
SNF8-216ENST00000573795 A0A1W2PQH9 124 aa23.18■■□□□ 1.3
SNF8-216ENST00000573795 PRR29P0C7W0 189 aa23.18■■□□□ 1.3
SNF8-216ENST00000573795 TRIM49P0CI25 452 aa23.18■■□□□ 1.3
SNF8-216ENST00000573795 TRIM49CP0CI26 452 aa23.18■■□□□ 1.3
SNF8-216ENST00000573795 NDUFV2P19404 249 aa23.18■■□□□ 1.3
SNF8-216ENST00000573795 ACO1P21399 889 aaKnown RBP23.18■■□□□ 1.3
SNF8-216ENST00000573795 ATP5C1P36542 298 aaKnown RBP23.18■■□□□ 1.3
SNF8-216ENST00000573795 MAPK8P45983 427 aa23.18■■□□□ 1.3
SNF8-216ENST00000573795 PPP3CAQ08209 521 aa23.18■■□□□ 1.3
SNF8-216ENST00000573795 TPGS1Q6ZTW0 290 aa23.18■■□□□ 1.3
SNF8-216ENST00000573795 DEFB119Q8N690 84 aa23.18■■□□□ 1.3
SNF8-216ENST00000573795 TAS1R2Q8TE23 839 aa23.18■■□□□ 1.3
SNF8-216ENST00000573795 CYFIP2Q96F07 1278 aa23.18■■□□□ 1.3
SNF8-216ENST00000573795 GABRG3Q99928 467 aa23.18■■□□□ 1.3
SNF8-216ENST00000573795 PNPLA8Q9NP80 782 aa23.18■■□□□ 1.3
SNF8-216ENST00000573795 MAPK13O15264 365 aa23.17■■□□□ 1.3
SNF8-216ENST00000573795 CISD3P0C7P0 127 aa23.17■■□□□ 1.3
SNF8-216ENST00000573795 RARGP13631 454 aa23.17■■□□□ 1.3
SNF8-216ENST00000573795 CMA1P23946 247 aa23.17■■□□□ 1.3
SNF8-216ENST00000573795 GCLMP48507 274 aa23.17■■□□□ 1.3
SNF8-216ENST00000573795 VAMP7P51809 220 aa23.17■■□□□ 1.3
SNF8-216ENST00000573795 RPL6Q02878 288 aaKnown RBP23.17■■□□□ 1.3
SNF8-216ENST00000573795 KLHDC10Q6PID8 442 aa23.17■■□□□ 1.3
SNF8-216ENST00000573795 UNQ6494/PRO21346Q6UXR6 183 aa23.17■■□□□ 1.3
SNF8-216ENST00000573795 SCD5Q86SK9 330 aa23.17■■□□□ 1.3
SNF8-216ENST00000573795 HSCBQ8IWL3 235 aa23.17■■□□□ 1.3
SNF8-216ENST00000573795 IPO4Q8TEX9 1081 aaKnown RBP23.17■■□□□ 1.3
SNF8-216ENST00000573795 ERLEC1Q96DZ1 483 aa23.17■■□□□ 1.3
SNF8-216ENST00000573795 CD93Q9NPY3 652 aa23.17■■□□□ 1.3
SNF8-216ENST00000573795 FRMD4BQ9Y2L6 1034 aa23.17■■□□□ 1.3
SNF8-216ENST00000573795 PCDHA5Q9Y5H7 936 aa23.17■■□□□ 1.3
SNF8-216ENST00000573795 AP5Z1O43299 807 aa23.16■■□□□ 1.3
SNF8-216ENST00000573795 CALUO43852 315 aaPredicted RBP23.16■■□□□ 1.3
SNF8-216ENST00000573795 CILPO75339 1184 aa23.16■■□□□ 1.3
SNF8-216ENST00000573795 HOXD12P35452 270 aa23.16■■□□□ 1.3
SNF8-216ENST00000573795 KIF11P52732 1056 aa23.16■■□□□ 1.3
SNF8-216ENST00000573795 NFIL3Q16649 462 aa23.16■■□□□ 1.3
SNF8-216ENST00000573795 NUDT18Q6ZVK8 323 aa23.16■■□□□ 1.3
SNF8-216ENST00000573795 SLC41A1Q8IVJ1 513 aa23.16■■□□□ 1.3
SNF8-216ENST00000573795 XPO6Q96QU8 1125 aaKnown RBP23.16■■□□□ 1.3
SNF8-216ENST00000573795 NT5C1AQ9BXI3 368 aa23.16■■□□□ 1.3
SNF8-216ENST00000573795 SLC6A17Q9H1V8 727 aa23.16■■□□□ 1.3
SNF8-216ENST00000573795 CYP3A43Q9HB55 503 aa23.16■■□□□ 1.3
SNF8-216ENST00000573795 CAPN10Q9HC96 672 aa23.16■■□□□ 1.3
SNF8-216ENST00000573795 WDR35Q9P2L0 1181 aa23.16■■□□□ 1.3
SNF8-216ENST00000573795 USP25Q9UHP3 1055 aa23.16■■□□□ 1.3
SNF8-216ENST00000573795 LSM7Q9UK45 103 aaKnown RBP23.16■■□□□ 1.3
SNF8-216ENST00000573795 RAD54BQ9Y620 910 aa23.16■■□□□ 1.3
SNF8-216ENST00000573795 MYL1P05976 194 aa23.15■■□□□ 1.3
SNF8-216ENST00000573795 NR2F2P24468 414 aa23.15■■□□□ 1.3
SNF8-216ENST00000573795 DPP6P42658 865 aa23.15■■□□□ 1.3
SNF8-216ENST00000573795 SLC36A4Q6YBV0 504 aa23.15■■□□□ 1.3
SNF8-216ENST00000573795 PIP4P1Q86T03 277 aa23.15■■□□□ 1.3
SNF8-216ENST00000573795 CHPFQ8IZ52 775 aa23.15■■□□□ 1.3
SNF8-216ENST00000573795 NIF3L1Q9GZT8 377 aa23.15■■□□□ 1.3
SNF8-216ENST00000573795 CACNA2D2Q9NY47 1150 aa23.15■■□□□ 1.3
SNF8-216ENST00000573795 FBXO10Q9UK96 956 aa23.15■■□□□ 1.3
SNF8-216ENST00000573795 USP3Q9Y6I4 520 aa23.15■■□□□ 1.3
SNF8-216ENST00000573795 FAM237AA0A1B0GTK4 181 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 STC2O76061 302 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 RHOBTB3O94955 611 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 KLKB1P03952 638 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 CFIP05156 583 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 HSP90AA1P07900 732 aaKnown RBP23.14■■□□□ 1.29
SNF8-216ENST00000573795 CD58P19256 250 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 DGKGP49619 791 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 ZNF33AQ06730 810 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 GOLGA8FQ08AF8 430 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 GOLGA8DPQ0D2H9 430 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 SEMA3BQ13214 749 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 DUOXA1Q1HG43 343 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 PPP1R26Q5T8A7 1209 aaPredicted RBP23.14■■□□□ 1.29
SNF8-216ENST00000573795 CCDC186Q7Z3E2 898 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 SPRYD3Q8NCJ5 442 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 BHMTQ93088 406 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 ADAM33Q9BZ11 813 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 PLK2Q9NYY3 685 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 DNMT3LQ9UJW3 386 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 SLC6A14Q9UN76 642 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 CYP8B1Q9UNU6 501 aa23.14■■□□□ 1.29
SNF8-216ENST00000573795 WASH3PC4AMC7 463 aa23.13■■□□□ 1.29
SNF8-216ENST00000573795 SERPINF2P08697 491 aa23.13■■□□□ 1.29
SNF8-216ENST00000573795 PLA2G4AP47712 749 aa23.13■■□□□ 1.29
SNF8-216ENST00000573795 MCCD1P59942 119 aaPredicted RBP23.13■■□□□ 1.29
SNF8-216ENST00000573795 DPYDQ12882 1025 aa23.13■■□□□ 1.29
SNF8-216ENST00000573795 C10orf120Q5SQS8 335 aa23.13■■□□□ 1.29
SNF8-216ENST00000573795 INTS8Q75QN2 995 aaKnown RBP23.13■■□□□ 1.29
SNF8-216ENST00000573795 ZNF276Q8N554 614 aa23.13■■□□□ 1.29
SNF8-216ENST00000573795 GATA6Q92908 595 aa23.13■■□□□ 1.29
SNF8-216ENST00000573795 SCNM1Q9BWG6 230 aa23.13■■□□□ 1.29
SNF8-216ENST00000573795 DUSP16Q9BY84 665 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms