RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 THG1LQ9NWX6 298 aaKnown RBP10.49□□□□□ -0.73
SMG6-213ENST00000573166 CCDC151A5D8V7 595 aa10.49□□□□□ -0.73
SMG6-213ENST00000573166 ATP9BO43861 1147 aa10.49□□□□□ -0.73
SMG6-213ENST00000573166 TUBP50607 506 aa10.49□□□□□ -0.73
SMG6-213ENST00000573166 GPM6BQ13491 265 aa10.49□□□□□ -0.73
SMG6-213ENST00000573166 RAPH1Q70E73 1250 aa10.49□□□□□ -0.73
SMG6-213ENST00000573166 ANKRD42Q8N9B4 389 aa10.49□□□□□ -0.73
SMG6-213ENST00000573166 OR6P1Q8NGX9 317 aa10.49□□□□□ -0.73
SMG6-213ENST00000573166 UCMAQ8WVF2 138 aa10.49□□□□□ -0.73
SMG6-213ENST00000573166 ATG4AQ8WYN0 398 aa10.49□□□□□ -0.73
SMG6-213ENST00000573166 TMA16Q96EY4 203 aaKnown RBP10.49□□□□□ -0.73
SMG6-213ENST00000573166 PCDHB18PQ96TA0 734 aa10.49□□□□□ -0.73
SMG6-213ENST00000573166 LHX5Q9H2C1 402 aa10.49□□□□□ -0.73
SMG6-213ENST00000573166 NRDE2Q9H7Z3 1164 aa10.49□□□□□ -0.73
SMG6-213ENST00000573166 RBM12Q9NTZ6 932 aaKnown RBP10.49□□□□□ -0.73
SMG6-213ENST00000573166 DNMT3LQ9UJW3 386 aa10.49□□□□□ -0.73
SMG6-213ENST00000573166 ADAM21Q9UKJ8 722 aa10.49□□□□□ -0.73
SMG6-213ENST00000573166 TRAV19A0A0A6YYK7 116 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 ENDOD1O94919 500 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 MMP8P22894 467 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 WARSP23381 471 aaKnown RBP10.48□□□□□ -0.73
SMG6-213ENST00000573166 GJA8P48165 433 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 MNAT1P51948 309 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 CAV1Q03135 178 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 SPOCD1Q6ZMY3 1216 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 LGI2Q8N0V4 545 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 FAM71DQ8N9W8 422 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 SMG8Q8ND04 991 aaKnown RBP10.48□□□□□ -0.73
SMG6-213ENST00000573166 SMG7Q92540 1137 aaKnown RBP10.48□□□□□ -0.73
SMG6-213ENST00000573166 SNF8Q96H20 258 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 SUSD3Q96L08 255 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 LRRC1Q9BTT6 524 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 MAGEB5Q9BZ81 275 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 TRIM7Q9C029 511 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 NSRP1Q9H0G5 558 aaKnown RBP10.48□□□□□ -0.73
SMG6-213ENST00000573166 EXOC1LA0A1B0GW35 172 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 MEIS3P2A8K0S8 358 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 PMM2O15305 246 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 TIMP1P01033 207 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 ASPAP45381 313 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 SLCO1A2P46721 670 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 SMAD3P84022 425 aaKnown RBP10.48□□□□□ -0.73
SMG6-213ENST00000573166 ACAP1Q15027 740 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 PCSK7Q16549 785 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 P3H1Q32P28 736 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 MFSD5Q6N075 450 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 TFB1MQ8WVM0 346 aaKnown RBP10.48□□□□□ -0.73
SMG6-213ENST00000573166 HNRNPABQ99729 332 aaKnown RBP10.48□□□□□ -0.73
SMG6-213ENST00000573166 TRIM51Q9BSJ1 452 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 OXCT2Q9BYC2 517 aaPredicted RBP10.48□□□□□ -0.73
SMG6-213ENST00000573166 MOSPD1Q9UJG1 213 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 VANGL2Q9ULK5 521 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 ZBTB42B2RXF5 422 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 CRCPO75575 148 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 PAMP19021 973 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 GGCXP38435 758 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 ZNF143P52747 638 aaPredicted RBP10.48□□□□□ -0.73
SMG6-213ENST00000573166 ZBTB16Q05516 673 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 CFAP157Q5JU67 520 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 SDE2Q6IQ49 451 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 PMF1Q6P1K2 205 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 CPLX4Q7Z7G2 160 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 CELF6Q96J87 481 aaKnown RBP10.48□□□□□ -0.73
SMG6-213ENST00000573166 SCYL1Q96KG9 808 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 TOX2Q96NM4 488 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 DCLK3Q9C098 648 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMG6-213ENST00000573166 DNAJB4Q9UDY4 337 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 SIX4Q9UIU6 781 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 MYH7BA7E2Y1 1941 aa10.48□□□□□ -0.73
SMG6-213ENST00000573166 CBX4O00257 560 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 PJA2O43164 708 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 ALDH3A1P30838 453 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 SLC5A3P53794 718 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 PRAMEP78395 509 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 OTUD4Q01804 1114 aaKnown RBP10.47□□□□□ -0.73
SMG6-213ENST00000573166 SMAD1Q15797 465 aaKnown RBP10.47□□□□□ -0.73
SMG6-213ENST00000573166 MGARPQ8TDB4 240 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 FAXDC2Q96IV6 333 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 KCNK16Q96T55 309 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 RAD9AQ99638 391 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 FAM124BQ9H5Z6 455 aaPredicted RBP10.47□□□□□ -0.73
SMG6-213ENST00000573166 L2HGDHQ9H9P8 463 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 TBK1Q9UHD2 729 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 DOCK1Q14185 1865 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 QSER1Q2KHR3 1735 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 EBAG9O00559 213 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 ZNF197O14709 1029 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 SASH3O75995 380 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 VIMP08670 466 aaKnown RBP10.47□□□□□ -0.73
SMG6-213ENST00000573166 HSPA8P11142 646 aaKnown RBP10.47□□□□□ -0.73
SMG6-213ENST00000573166 H2AFXP16104 143 aaPredicted RBP10.47□□□□□ -0.73
SMG6-213ENST00000573166 OR1E1P30953 314 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 PPARGP37231 505 aaPredicted RBP10.47□□□□□ -0.73
SMG6-213ENST00000573166 OXCT1P55809 520 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 PDIA2Q13087 525 aaKnown RBP10.47□□□□□ -0.73
SMG6-213ENST00000573166 MEI1Q5TIA1 1274 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 TPGS1Q6ZTW0 290 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 EFHBQ8N7U6 833 aa10.47□□□□□ -0.73
SMG6-213ENST00000573166 ACTL9Q8TC94 416 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms