RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 ID4P47928 161 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 RAD23BP54727 409 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 ADKP55263 362 aaKnown RBP12.46□□□□□ -0.41
NDE1-206ENST00000572967 PDGFRLQ15198 375 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 ZNF394Q53GI3 561 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 TMEM196Q5HYL7 178 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 ARHGAP17Q68EM7 881 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 CCDC186Q7Z3E2 898 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 CCDC170Q8IYT3 715 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 TC2NQ8N9U0 490 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 SLC4A11Q8NBS3 891 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 EPS8L1Q8TE68 723 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 OSCP1Q8WVF1 389 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 ATP2A3Q93084 1043 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 CCDC42Q96M95 316 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 BAG1Q99933 345 aaPredicted RBP12.46□□□□□ -0.41
NDE1-206ENST00000572967 TTLL2Q9BWV7 592 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 FAM126AQ9BYI3 521 aaPredicted RBP12.46□□□□□ -0.41
NDE1-206ENST00000572967 FAM49BQ9NUQ9 324 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 SMPD4Q9NXE4 827 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 TRPM5Q9NZQ8 1165 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 AJAP1Q9UKB5 411 aaPredicted RBP12.46□□□□□ -0.41
NDE1-206ENST00000572967 RALGAPA1Q6GYQ0 2036 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 SOBPA7XYQ1 873 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 K7ESF4 209 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 AKR1B10O60218 316 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 RNF40O75150 1001 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 SETSIPP0DME0 302 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 HDCP19113 662 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 SLC5A3P53794 718 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 NRLP54845 237 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 CDR2Q01850 454 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 GRSF1Q12849 480 aaKnown RBP eCLIP12.45□□□□□ -0.42
NDE1-206ENST00000572967 TAF10Q12962 218 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 EML3Q32P44 896 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 ACOT1Q86TX2 421 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 FBXO32Q969P5 355 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 RMDN1Q96DB5 314 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 TRIM44Q96DX7 344 aaPredicted RBP12.45□□□□□ -0.42
NDE1-206ENST00000572967 SMARCD1Q96GM5 515 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 C8orf48Q96LL4 319 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 SLITRK1Q96PX8 696 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 ECT2Q9H8V3 914 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 SEPT11Q9NVA2 429 aaKnown RBP12.45□□□□□ -0.42
NDE1-206ENST00000572967 GMEB2Q9UKD1 530 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 RAB23Q9ULC3 237 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 ARHGAP26Q9UNA1 814 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 CPQQ9Y646 472 aa12.45□□□□□ -0.42
NDE1-206ENST00000572967 ZFHX2Q9C0A1 2572 aaPredicted RBP12.45□□□□□ -0.42
NDE1-206ENST00000572967 LEFTY2O00292 366 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 OAS1P00973 400 aaKnown RBP12.44□□□□□ -0.42
NDE1-206ENST00000572967 FAM200BP0CF97 657 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 MBL2P11226 248 aaPredicted RBP12.44□□□□□ -0.42
NDE1-206ENST00000572967 TNFAIP3P21580 790 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 FECHP22830 423 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 GJA4P35212 333 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 CLCN1P35523 988 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 PXNP49023 591 aaPredicted RBP12.44□□□□□ -0.42
NDE1-206ENST00000572967 BCAT1P54687 386 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 ZXDBP98169 803 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
NDE1-206ENST00000572967 SPA17Q15506 151 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 CNGA2Q16280 664 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 LCLAT1Q6UWP7 414 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 IRF2BP2Q7Z5L9 587 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 SLC47A2Q86VL8 602 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 TMEM35BQ8NCS4 154 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 IPO4Q8TEX9 1081 aaKnown RBP12.44□□□□□ -0.42
NDE1-206ENST00000572967 WHAMMQ8TF30 809 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 SECISBP2LQ93073 1101 aaKnown RBP12.44□□□□□ -0.42
NDE1-206ENST00000572967 CYFIP2Q96F07 1278 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 TRIM11Q96F44 468 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 CEP295NLQ96MC4 621 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 HHIPQ96QV1 700 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 KCNK16Q96T55 309 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 HNRNPABQ99729 332 aaKnown RBP12.44□□□□□ -0.42
NDE1-206ENST00000572967 AGPAT1Q99943 283 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 P2RY13Q9BPV8 354 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.44□□□□□ -0.42
NDE1-206ENST00000572967 HAUS4Q9H6D7 363 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 DMAP1Q9NPF5 467 aaPredicted RBP12.44□□□□□ -0.42
NDE1-206ENST00000572967 POLR3BQ9NW08 1133 aaPredicted RBP12.44□□□□□ -0.42
NDE1-206ENST00000572967 EHD2Q9NZN4 543 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 USP18Q9UMW8 372 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 PCDHGC3Q9UN70 934 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.44□□□□□ -0.42
NDE1-206ENST00000572967 MYOFQ9NZM1 2061 aa12.44□□□□□ -0.42
NDE1-206ENST00000572967 CFAP54Q96N23 3096 aa12.43□□□□□ -0.42
NDE1-206ENST00000572967 ZNF840PA6NDX5 716 aa12.43□□□□□ -0.42
NDE1-206ENST00000572967 M0QYV0 167 aa12.43□□□□□ -0.42
NDE1-206ENST00000572967 O00370 1275 aa12.43□□□□□ -0.42
NDE1-206ENST00000572967 TRDMT1O14717 391 aaKnown RBP12.43□□□□□ -0.42
NDE1-206ENST00000572967 ARHGAP6O43182 974 aa12.43□□□□□ -0.42
NDE1-206ENST00000572967 AP1G2O75843 785 aa12.43□□□□□ -0.42
NDE1-206ENST00000572967 PAPSS2O95340 614 aaPredicted RBP12.43□□□□□ -0.42
NDE1-206ENST00000572967 OLFM2O95897 454 aa12.43□□□□□ -0.42
NDE1-206ENST00000572967 CYP17A1P05093 508 aa12.43□□□□□ -0.42
NDE1-206ENST00000572967 PNMA6AP0CW24 399 aaPredicted RBP12.43□□□□□ -0.42
NDE1-206ENST00000572967 BRD2P25440 801 aaKnown RBP12.43□□□□□ -0.42
NDE1-206ENST00000572967 YWHAQP27348 245 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms