RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 KINO60870 393 aaKnown RBP7.88□□□□□ -1.15
NUP88-205ENST00000572809 GADD45BO75293 160 aaPredicted RBP7.88□□□□□ -1.15
NUP88-205ENST00000572809 RTN3O95197 1032 aaPredicted RBP7.88□□□□□ -1.15
NUP88-205ENST00000572809 CKMP06732 381 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 EPB41P11171 864 aaKnown RBP7.88□□□□□ -1.15
NUP88-205ENST00000572809 CHRNB1P11230 501 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 PCSK2P16519 638 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 PFKLP17858 780 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 TRIM21P19474 475 aaKnown RBP7.88□□□□□ -1.15
NUP88-205ENST00000572809 YWHAQP27348 245 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 ASPAP45381 313 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 PDE6CP51160 858 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 NDST1P52848 882 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 CACNA2D1P54289 1103 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 AMPD2Q01433 879 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 IFRD2Q12894 506 aaPredicted RBP7.88□□□□□ -1.15
NUP88-205ENST00000572809 TAF10Q12962 218 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 MTAPQ13126 283 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 RUNX3Q13761 415 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 ZNF528Q3MIS6 628 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 DGKKQ5KSL6 1271 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 SH3PXD2AQ5TCZ1 1133 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 TRIM68Q6AZZ1 485 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 PAQR9Q6ZVX9 377 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 ASCL5Q7RTU5 278 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 ZNF295-AS1Q8N0V1 137 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 ADSSL1Q8N142 457 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 TTC16Q8NEE8 873 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 SLITRK1Q96PX8 696 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 SLC22A12Q96S37 553 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 EBF3Q9H4W6 596 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 CYP3A43Q9HB55 503 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 TMEM30AQ9NV96 361 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 RAB20Q9NX57 234 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 CHORDC1Q9UHD1 332 aaPredicted RBP7.88□□□□□ -1.15
NUP88-205ENST00000572809 R4GN57 208 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 TICRRQ7Z2Z1 1910 aa7.88□□□□□ -1.15
NUP88-205ENST00000572809 WDFY4Q6ZS81 3184 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 PRR23AA6NEV1 266 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 OTOL1A6NHN0 477 aaPredicted RBP7.87□□□□□ -1.15
NUP88-205ENST00000572809 FZD6O60353 706 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 CCDC130P13994 396 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 PPP1R2P41236 205 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 PMS1P54277 932 aaKnown RBP7.87□□□□□ -1.15
NUP88-205ENST00000572809 MAP3K7CLP57077 242 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 LRRC63Q05C16 580 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 ORC1Q13415 861 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 STIM1Q13586 685 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 LRRC32Q14392 662 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 PPP2R5DQ14738 602 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 MTF1Q14872 753 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 PON2Q15165 354 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 PDGFRLQ15198 375 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 WDR44Q5JSH3 913 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 TCERG1LQ5VWI1 586 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 ZC3H14Q6PJT7 736 aaKnown RBP7.87□□□□□ -1.15
NUP88-205ENST00000572809 TXNDC11Q6PKC3 985 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 FILIP1Q7Z7B0 1213 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 FAM35AQ86V20 835 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 FUKQ8N0W3 1084 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 C12orf29Q8N999 325 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 FBXL13Q8NEE6 735 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 RIN3Q8TB24 985 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 SLC2A14Q8TDB8 520 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 SH3RF2Q8TEC5 729 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 OSCP1Q8WVF1 389 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 ATRIPQ8WXE1 791 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 OVCA2Q8WZ82 227 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 MRRFQ96E11 262 aaKnown RBP7.87□□□□□ -1.15
NUP88-205ENST00000572809 CYFIP2Q96F07 1278 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 SMARCD1Q96GM5 515 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 DHTKD1Q96HY7 919 aaPredicted RBP7.87□□□□□ -1.15
NUP88-205ENST00000572809 FAXDC2Q96IV6 333 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 SMOQ99835 787 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 IER2Q9BTL4 223 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 NT5C1AQ9BXI3 368 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 DNAI2Q9GZS0 605 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 RNF38Q9H0F5 515 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 LINC00597Q9H2U6 94 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 CHRDQ9H2X0 955 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 APOBEC3GQ9HC16 384 aaKnown RBP7.87□□□□□ -1.15
NUP88-205ENST00000572809 NEUROD4Q9HD90 331 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 DMAP1Q9NPF5 467 aaPredicted RBP7.87□□□□□ -1.15
NUP88-205ENST00000572809 HPS4Q9NQG7 708 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 COMMD8Q9NX08 183 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 DUS2Q9NX74 493 aaKnown RBP7.87□□□□□ -1.15
NUP88-205ENST00000572809 IL37Q9NZH6 218 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 MAN1B1Q9UKM7 699 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 ARHGAP26Q9UNA1 814 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 MIA3Q5JRA6 1907 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 DENND4CQ5VZ89 1909 aa7.87□□□□□ -1.15
NUP88-205ENST00000572809 NUP210Q8TEM1 1887 aaPredicted RBP7.87□□□□□ -1.15
NUP88-205ENST00000572809 CACNA1HO95180 2353 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 TRIM49BA6NDI0 452 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 LEFTY2O00292 366 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 TRDMT1O14717 391 aaKnown RBP7.86□□□□□ -1.15
NUP88-205ENST00000572809 PSMA7O14818 248 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 SLC16A3O15427 465 aaKnown RBP7.86□□□□□ -1.15
NUP88-205ENST00000572809 CILPO75339 1184 aa7.86□□□□□ -1.15
NUP88-205ENST00000572809 BEST1O76090 585 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms