RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 RASAL2Q9UJF2 1139 aa16.57■□□□□ 0.24
CHD3-215ENST00000572750 CEP83Q9Y592 693 aa16.57■□□□□ 0.24
CHD3-215ENST00000572750 LRRC53A6NM62 1247 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 PAPSS1O43252 624 aaPredicted RBP16.56■□□□□ 0.24
CHD3-215ENST00000572750 FBXO21O94952 628 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 ERBB2P04626 1255 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 ARSAP15289 507 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 TCF3P15923 654 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 ATP5C1P36542 298 aaKnown RBP16.56■□□□□ 0.24
CHD3-215ENST00000572750 ACADSBP45954 432 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 SOX9P48436 509 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 PLCB2Q00722 1185 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 EFEMP1Q12805 493 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 PTPN20Q4JDL3 420 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 BSPRYQ5W0U4 402 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 BTBD8Q5XKL5 378 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 TPRG1Q6ZUI0 275 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 SCML4Q8N228 414 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 IRGQQ8WZA9 623 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 PPP1R13BQ96KQ4 1090 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 NOX5Q96PH1 765 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 FAM83CQ9BQN1 747 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 MFSD1Q9H3U5 465 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 EBF3Q9H4W6 596 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 HPS4Q9NQG7 708 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 DUS2Q9NX74 493 aaKnown RBP16.56■□□□□ 0.24
CHD3-215ENST00000572750 DNMT3LQ9UJW3 386 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 PIAS3Q9Y6X2 628 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 MIA3Q5JRA6 1907 aa16.56■□□□□ 0.24
CHD3-215ENST00000572750 ATRXP46100 2492 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 LTFP02788 710 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 CHRNB2P17787 502 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 IFNAR2P48551 515 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 FMO1Q01740 532 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 CDR2Q01850 454 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 SLC44A4Q53GD3 710 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 E4F1Q66K89 784 aaPredicted RBP16.55■□□□□ 0.24
CHD3-215ENST00000572750 CWF19L1Q69YN2 538 aaKnown RBP16.55■□□□□ 0.24
CHD3-215ENST00000572750 KLHDC10Q6PID8 442 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 FAM183BPQ6ZVS7 135 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 TADA2BQ86TJ2 420 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 TMEM110Q86TL2 294 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 DDX42Q86XP3 938 aaKnown RBP eCLIP16.55■□□□□ 0.24
CHD3-215ENST00000572750 FLCNQ8NFG4 579 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 CSGALNACT1Q8TDX6 532 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 IPO4Q8TEX9 1081 aaKnown RBP16.55■□□□□ 0.24
CHD3-215ENST00000572750 OSCP1Q8WVF1 389 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 FAM149B1Q96BN6 582 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 CDK5RAP1Q96SZ6 601 aaKnown RBP16.55■□□□□ 0.24
CHD3-215ENST00000572750 KLF16Q9BXK1 252 aaPredicted RBP16.55■□□□□ 0.24
CHD3-215ENST00000572750 SYNCQ9H7C4 482 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 TBC1D17Q9HA65 648 aa16.55■□□□□ 0.24
CHD3-215ENST00000572750 OTOL1A6NHN0 477 aaPredicted RBP16.54■□□□□ 0.24
CHD3-215ENST00000572750 LSM8O95777 96 aaKnown RBP16.54■□□□□ 0.24
CHD3-215ENST00000572750 HMBSP08397 361 aa16.54■□□□□ 0.24
CHD3-215ENST00000572750 CD72P21854 359 aa16.54■□□□□ 0.24
CHD3-215ENST00000572750 CDH5P33151 784 aaPredicted RBP16.54■□□□□ 0.24
CHD3-215ENST00000572750 NOMO3P69849 1222 aa16.54■□□□□ 0.24
CHD3-215ENST00000572750 PDGFRLQ15198 375 aa16.54■□□□□ 0.24
CHD3-215ENST00000572750 EML3Q32P44 896 aa16.54■□□□□ 0.24
CHD3-215ENST00000572750 NAA35Q5VZE5 725 aa16.54■□□□□ 0.24
CHD3-215ENST00000572750 ZNF677Q86XU0 584 aa16.54■□□□□ 0.24
CHD3-215ENST00000572750 ZNF276Q8N554 614 aa16.54■□□□□ 0.24
CHD3-215ENST00000572750 TMEM35BQ8NCS4 154 aa16.54■□□□□ 0.24
CHD3-215ENST00000572750 RNF139Q8WU17 664 aa16.54■□□□□ 0.24
CHD3-215ENST00000572750 GOLGA1Q92805 767 aa16.54■□□□□ 0.24
CHD3-215ENST00000572750 FOXQ1Q9C009 403 aa16.54■□□□□ 0.24
CHD3-215ENST00000572750 TRPV5Q9NQA5 729 aa16.54■□□□□ 0.24
CHD3-215ENST00000572750 ABCC13Q9NSE7 274 aa16.54■□□□□ 0.24
CHD3-215ENST00000572750 MARCH2Q9P0N8 246 aa16.54■□□□□ 0.24
CHD3-215ENST00000572750 SH3BP1Q9Y3L3 701 aa16.54■□□□□ 0.24
CHD3-215ENST00000572750 OTOGLQ3ZCN5 2332 aa16.53■□□□□ 0.24
CHD3-215ENST00000572750 SHISA7A6NL88 538 aa16.53■□□□□ 0.24
CHD3-215ENST00000572750 SART1O43290 800 aaKnown RBP16.53■□□□□ 0.24
CHD3-215ENST00000572750 MSI1O43347 362 aaKnown RBP16.53■□□□□ 0.24
CHD3-215ENST00000572750 TPM3P06753 285 aa16.53■□□□□ 0.24
CHD3-215ENST00000572750 FERP16591 822 aa16.53■□□□□ 0.24
CHD3-215ENST00000572750 KPNA1P52294 538 aaPredicted RBP16.53■□□□□ 0.24
CHD3-215ENST00000572750 GOLGA8FQ08AF8 430 aa16.53■□□□□ 0.24
CHD3-215ENST00000572750 GOLGA8DPQ0D2H9 430 aa16.53■□□□□ 0.24
CHD3-215ENST00000572750 TAF5Q15542 800 aa16.53■□□□□ 0.24
CHD3-215ENST00000572750 ITPRIPL2Q3MIP1 535 aa16.53■□□□□ 0.24
CHD3-215ENST00000572750 C2CD6Q53TS8 623 aa16.53■□□□□ 0.24
CHD3-215ENST00000572750 BBS7Q8IWZ6 715 aa16.53■□□□□ 0.24
CHD3-215ENST00000572750 CPA5Q8WXQ8 436 aa16.53■□□□□ 0.24
CHD3-215ENST00000572750 ATP2A3Q93084 1043 aa16.53■□□□□ 0.24
CHD3-215ENST00000572750 LINC00597Q9H2U6 94 aa16.53■□□□□ 0.24
CHD3-215ENST00000572750 OLA1Q9NTK5 396 aaKnown RBP16.53■□□□□ 0.24
CHD3-215ENST00000572750 SEPT11Q9NVA2 429 aaKnown RBP16.53■□□□□ 0.24
CHD3-215ENST00000572750 SFMBT1Q9UHJ3 866 aa16.53■□□□□ 0.24
CHD3-215ENST00000572750 MYO6Q9UM54 1294 aa16.53■□□□□ 0.24
CHD3-215ENST00000572750 KIAA1549LQ6ZVL6 1849 aa16.53■□□□□ 0.24
CHD3-215ENST00000572750 ASPMQ8IZT6 3477 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 SLC12A8A0AV02 714 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 E2F8A0AVK6 867 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 CBFA2T2O43439 604 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 GREM1O60565 184 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 STC2O76061 302 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 GYPCP04921 128 aa16.52■□□□□ 0.24
CHD3-215ENST00000572750 FYNP06241 537 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms